Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03249 and RBAM_019940
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:22
# Commandline: needle
# -asequence dna-align/BSNT_03249___yplQ.1.9828.seq
# -bsequence dna-align/RBAM_019940___yplQ.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03249___yplQ-RBAM_019940___yplQ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03249___yplQ-RBAM_019940___yplQ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03249___yplQ
# 2: RBAM_019940___yplQ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 649
# Identity: 482/649 (74.3%)
# Similarity: 482/649 (74.3%)
# Gaps: 17/649 ( 2.6%)
# Score: 1707.0
#
#
#=======================================
BSNT_03249___ 1 TTGTTTACAATCAAAGAAGAGATCGCCAATGCGATTACACACGGCATCGG 50
|||||.|||||.||||||||.|||||.|||||..|.||||||||.|||||
RBAM_019940__ 1 TTGTTCACAATAAAAGAAGAAATCGCAAATGCCGTCACACACGGAATCGG 50
BSNT_03249___ 51 TGTCCTCTTATCCATCCCAGC-ATTAGTGTTTCTAATCATATTTGCGGCT 99
|||..|..|.||.||.||.|| .||| |.|||||.||.||.||.||||..
RBAM_019940__ 51 TGTATTGCTGTCGATTCCGGCGCTTA-TTTTTCTCATTATCTTCGCGGTG 99
BSNT_03249___ 100 AATTACGGGTCTG----CATGGGACATTATCAGCTTTACAATATTCGGTG 145
||.|||||.|| | || |||||..||||||||.||||.|||||.|
RBAM_019940__ 100 AAATACGGCTC-GCCGACA---GACATCGTCAGCTTTTCAATCTTCGGCG 145
BSNT_03249___ 146 TCTCTATGCTGCTGTTATATTTGAGCTCCACCCTGCTTCACAGCA-TCAC 194
..||.|||||||||.|.|||.|.|||||.||.||..|.||||||| |||
RBAM_019940__ 146 CTTCAATGCTGCTGCTGTATCTCAGCTCGACTCTTTTGCACAGCATTCA- 194
BSNT_03249___ 195 ACATAAAAAAACGAAGGACATTTTGGAGATTATTGATCATAGCGCGATTT 244
.||||||||||||||.||||||.|.||||||.|.||||||..||||||.|
RBAM_019940__ 195 GCATAAAAAAACGAAAGACATTCTTGAGATTGTGGATCATTCCGCGATAT 244
BSNT_03249___ 245 ACGTACTCATCGCCGGAACCTACACGCCTTTTTTGCTTGGGCCGCTGAAA 294
|||||.|.||.||||||||.||.|||||.|||||..|.||.||.||.|||
RBAM_019940__ 245 ACGTATTAATAGCCGGAACATATACGCCATTTTTATTAGGACCCCTTAAA 294
BSNT_03249___ 295 GGCACACTCGGCTTTACCCTGTTGGTTATCGTATGGTCACTTGCCCTAGG 344
||..|.|||||..|.|||||.||..||||.||.|||||.||||||.|.||
RBAM_019940__ 295 GGGGCGCTCGGTCTGACCCTTTTAATTATTGTTTGGTCGCTTGCCATCGG 344
BSNT_03249___ 345 CGGAATCGTTTTTAAAATTTTCTTTGTGAAACGGTTTATCCTATTGTCAA 394
.||.|||||.||||||||.||.||.|||||.|||||||||.|.||.||||
RBAM_019940__ 345 AGGCATCGTGTTTAAAATCTTTTTCGTGAAGCGGTTTATCATTTTTTCAA 394
BSNT_03249___ 395 C-CTTCGTGTATTTAGTCATGGGGTGGCTGATGATTATTGCAGTTAAACC 443
| ||| ||.||||||.|.|||||.||||||||.||..|.||..|||||||
RBAM_019940__ 395 CGCTT-GTCTATTTAATGATGGGCTGGCTGATCATCGTCGCCATTAAACC 443
BSNT_03249___ 444 TTTATATGTTTCACTGAGCGGAGCGGGATTCAGCCTCCTTTTTCTCGGCG 493
..|.||.|.|||.|||...||..|.||.|||.||||.|||.||.||||||
RBAM_019940__ 444 GCTGTACGCTTCGCTGTCAGGCCCCGGTTTCGGCCTTCTTCTTTTCGGCG 493
BSNT_03249___ 494 GCATTTTATACTCTGTCGGGACCATCTTTTACATTTGGAAAAAGATCCCC 543
||.|.||.||.||.|.|||.||.||.|||||.|||||||.||||.|.||.
RBAM_019940__ 494 GCTTATTGTATTCCGCCGGCACAATATTTTATATTTGGAGAAAGGTTCCG 543
BSNT_03249___ 544 TTCCATCACGCCATTTGGCACAGCTTTGTATTGGGCGGGAGCGCCGCCAT 593
|..||||||||||||||||||||.|||||.||.|||||.||||||.|.||
RBAM_019940__ 544 TATCATCACGCCATTTGGCACAGTTTTGTTTTAGGCGGCAGCGCCTCGAT 593
BSNT_03249___ 594 GTTTTTCTGCGTGCTCTTCTATTGTGTAAAAGTGCCGTTCCTTTCGTAA 642
|||||||||..|..|.||.|||||.||.|||||.||.|| |.||..|
RBAM_019940__ 594 GTTTTTCTGTATTTTATTTTATTGCGTCAAAGTCCCCTT--TATCTGA- 639
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