Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03248 and RBAM_019930

See DNA alignment / Visit BSNT_03248 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:21
# Commandline: needle
#    -asequence pep-align/BSNT_03248___yplP.1.9828.seq
#    -bsequence pep-align/RBAM_019930___yplP.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03248___yplP-RBAM_019930___yplP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03248___yplP-RBAM_019930___yplP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03248___yplP
# 2: RBAM_019930___yplP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 335
# Identity:     198/335 (59.1%)
# Similarity:   247/335 (73.7%)
# Gaps:           9/335 ( 2.7%)
# Score: 946.5
# 
#
#=======================================

BSNT_03248___      1 MNSAPKLNTFQHLIGEHQTFLEAKRIAKQFSLSELPVLITGKIGTGKNHF     50
                     |:...:.:.|..|.|||.||.||||:|.||:||:|||.|||::||||...
RBAM_019930__      1 MSVIEQTDPFYQLAGEHHTFSEAKRLASQFALSDLPVFITGEVGTGKKQM     50

BSNT_03248___     51 AHAIHLESSRSNEPFMSVNCSTHSEETLFHELFGPNGNTGVFQKAVRGTL    100
                     |.|||.:|.|::|.|::|:|| .|||.|.:||||..   |...:|.||||
RBAM_019930__     51 AKAIHHKSRRNSELFITVHCS-QSEERLEYELFGAE---GALNRASRGTL     96

BSNT_03248___    101 FLDDVWRMPASVQAQLLKALDSDTEKPRMICAS----ADRSVEHTFRQDL    146
                     ||.::..||.||||:||..||:.. ..|:|.:|    .|...|:||.|||
RBAM_019930__     97 FLYEIGDMPLSVQARLLSKLDAGL-SARIIASSTADLGDTGAENTFSQDL    145

BSNT_03248___    147 FYRLNILTLTLPELSERKSDIPLLTQHFLSNSGQQFLIDPSVFPVLEKHA    196
                     ||||::|.|.||.|||||||||||.||.|:.|||...|||||:|:.|:|.
RBAM_019930__    146 FYRLHVLCLPLPALSERKSDIPLLLQHMLTASGQHIHIDPSVYPLFERHT    195

BSNT_03248___    197 FEGNVRELKNAADYMAAVSSGGTIQPYDLPPYIRGAIDRKTSKKKAKLLT    246
                     |.||:|||:|||.||||.:||.||.|.|:|.||:.:...||:|||.|.||
RBAM_019930__    196 FNGNIRELQNAAYYMAAAASGSTIYPDDVPLYIKNSQKAKTAKKKEKRLT    245

BSNT_03248___    247 LMEKAEFLFILETIKVLNEKGEPASRRIISEHSKNTQTSLTPQQVRSRLD    296
                     ||||.|||||||:||.||.||||||||.|||.|:|:..:|:|||||:|||
RBAM_019930__    246 LMEKEEFLFILESIKDLNTKGEPASRRSISELSENSTMTLSPQQVRNRLD    295

BSNT_03248___    297 YLEKKDYVTKSRGRAGTKITFEGLSFIETLKNQMI    331
                     ||||.:||||.|||||||||.|||||:::|:.|::
RBAM_019930__    296 YLEKMNYVTKGRGRAGTKITLEGLSFLQSLQKQIL    330


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