Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03245 and RBAM_019910

See DNA alignment / Visit BSNT_03245 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:21
# Commandline: needle
#    -asequence pep-align/BSNT_03245___ypmP.1.9828.seq
#    -bsequence pep-align/RBAM_019910___ypmP.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03245___ypmP-RBAM_019910___ypmP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03245___ypmP-RBAM_019910___ypmP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03245___ypmP
# 2: RBAM_019910___ypmP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 83
# Identity:      62/83 (74.7%)
# Similarity:    71/83 (85.5%)
# Gaps:           0/83 ( 0.0%)
# Score: 337.0
# 
#
#=======================================

BSNT_03245___      1 MLLKSLEFKRDDGIQVKVTEIPVLKEDEHYFFMLHHHLQFYLKEVFSSNS     50
                     ||||||||||.||||||||||||:.|.|||||.:|.||:.||:|||:|.|
RBAM_019910__      1 MLLKSLEFKRQDGIQVKVTEIPVVTEGEHYFFQIHQHLELYLREVFASQS     50

BSNT_03245___     51 RAKVYSFRHYMKRRMKWADYQAVFHQEVLKHNA     83
                     ...|||||.|:||||||.||:|||:||:|||||
RBAM_019910__     51 VRTVYSFRQYVKRRMKWKDYEAVFNQEILKHNA     83


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