Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03241 and RBAM_019880
See
DNA alignment /
Visit
BSNT_03241 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:21
# Commandline: needle
# -asequence pep-align/BSNT_03241___ypmS.1.9828.seq
# -bsequence pep-align/RBAM_019880___ypmS.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03241___ypmS-RBAM_019880___ypmS.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03241___ypmS-RBAM_019880___ypmS.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03241___ypmS
# 2: RBAM_019880___ypmS
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 187
# Identity: 141/187 (75.4%)
# Similarity: 169/187 (90.4%)
# Gaps: 0/187 ( 0.0%)
# Score: 756.0
#
#
#=======================================
BSNT_03241___ 1 MNKWKRLFFILLAINFILAAGFVALVLLPGEQAQVKDSSESEYGFQVTST 50
|.|||.|||:|||:|.|.||..|.|:::|||||:::|.::|||||.:||:
RBAM_019880__ 1 MKKWKSLFFVLLALNVIAAAVIVTLLVMPGEQAKIQDQTKSEYGFHITSS 50
BSNT_03241___ 51 KESLAAFVNSYLNDKASNKLDYKVEIDDDVHVAGKIKAFSTSIDAFIAFE 100
|||||.|||:||.:||||:|||||:|::|||||||||||||||:|.:.||
RBAM_019880__ 51 KESLARFVNAYLKEKASNQLDYKVDINNDVHVAGKIKAFSTSINAVVTFE 100
BSNT_03241___ 101 PTVKKNGDVELNVTKFSLGKLSIPISFVLNYMDSFYELPSFVHVHPGEKS 150
|:|::||||.|.|||||||:||:||||||||||||||||||||||.|:||
RBAM_019880__ 101 PSVQENGDVMLKVTKFSLGELSLPISFVLNYMDSFYELPSFVHVHSGDKS 150
BSNT_03241___ 151 IEVRLSEMPLTNGMYVKADKINLEKDEIEFSYYHPKQ 187
||:|||||||.||||||||||||:.||||||||||||
RBAM_019880__ 151 IEIRLSEMPLDNGMYVKADKINLDTDEIEFSYYHPKQ 187
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.