Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03237 and RBAM_019870

See DNA alignment / Visit BSNT_03237 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:21
# Commandline: needle
#    -asequence pep-align/BSNT_03237___ypoP.1.9828.seq
#    -bsequence pep-align/RBAM_019870___ypoP.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03237___ypoP-RBAM_019870___ypoP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03237___ypoP-RBAM_019870___ypoP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03237___ypoP
# 2: RBAM_019870___ypoP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 141
# Identity:     131/141 (92.9%)
# Similarity:   137/141 (97.2%)
# Gaps:           0/141 ( 0.0%)
# Score: 671.0
# 
#
#=======================================

BSNT_03237___      1 MKVRTQMMYDMETLLRKVFKQIRNEINEILDKELSRNEFTILRILSEQGP     50
                     ||||||||||||.||||||||||||:|||||||||||||.||||||||||
RBAM_019870__      1 MKVRTQMMYDMEALLRKVFKQIRNEVNEILDKELSRNEFIILRILSEQGP     50

BSNT_03237___     51 KKVTEFAPILEVSASHITAVTDALVEKEWITRIRSKEDRRIIRIHITEAG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_019870__     51 KKVTEFAPILEVSASHITAVTDALVEKEWITRIRSKEDRRIIRIHITEAG    100

BSNT_03237___    101 EKVLQHFNEKKTEYFFKRFDCYTDAELATLIELFSKLDKKR    141
                     ||::.|||:|||||||||||||:|.||||||:|||||||||
RBAM_019870__    101 EKIVDHFNQKKTEYFFKRFDCYSDEELATLIKLFSKLDKKR    141


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