Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03236 and RBAM_019860

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:21
# Commandline: needle
#    -asequence pep-align/BSNT_03236___msrA.1.9828.seq
#    -bsequence pep-align/RBAM_019860___msrA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03236___msrA-RBAM_019860___msrA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03236___msrA-RBAM_019860___msrA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03236___msrA
# 2: RBAM_019860___msrA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 177
# Identity:     156/177 (88.1%)
# Similarity:   167/177 (94.4%)
# Gaps:           0/177 ( 0.0%)
# Score: 877.0
# 
#
#=======================================

BSNT_03236___      1 MSEKKEIATFAGGCFWCMVKPFDEQPGIEKVVSGYTGGHTENPTYEEVCS     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_019860__      1 MSEKKEIATFAGGCFWCMVKPFDEQPGIEKVVSGYTGGHTENPTYEEVCS     50

BSNT_03236___     51 ETTGHREAVQITFNPDVFPYEKLLELFWQQIDPTDAGGQFADRGSSYRAA    100
                     |||||||||||||.||::|||||:||||||||||||||||||||||||||
RBAM_019860__     51 ETTGHREAVQITFQPDIYPYEKLVELFWQQIDPTDAGGQFADRGSSYRAA    100

BSNT_03236___    101 IFYHNDKQKELAEASKQRLAESGIFKDPIVTDILKAEPFYEAEGYHQHFY    150
                     |:||||:||::|||||::|.||||||.|||||||||||||||||||||||
RBAM_019860__    101 IYYHNDEQKQIAEASKKQLEESGIFKKPIVTDILKAEPFYEAEGYHQHFY    150

BSNT_03236___    151 KKNPAHYQRYRTGSGRAGFISEHWGAK    177
                     ||||.||.|||.||||.||:.|||..:
RBAM_019860__    151 KKNPDHYGRYRVGSGRQGFLDEHWRDR    177


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