Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03236 and RBAM_019860
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:21
# Commandline: needle
# -asequence dna-align/BSNT_03236___msrA.1.9828.seq
# -bsequence dna-align/RBAM_019860___msrA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03236___msrA-RBAM_019860___msrA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03236___msrA-RBAM_019860___msrA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03236___msrA
# 2: RBAM_019860___msrA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 536
# Identity: 428/536 (79.9%)
# Similarity: 428/536 (79.9%)
# Gaps: 4/536 ( 0.7%)
# Score: 1703.0
#
#
#=======================================
BSNT_03236___ 1 ATGTCTGAAAAAAAAGAAATCGCCACATTTGCAGGAGGCTGTTTTTGGTG 50
|||||.|||||||||||||||||||||||||||||.||||||||||||||
RBAM_019860__ 1 ATGTCAGAAAAAAAAGAAATCGCCACATTTGCAGGCGGCTGTTTTTGGTG 50
BSNT_03236___ 51 TATGGTTAAACCTTTTGACGAACAGCCGGGAATTGAAAAAGTGGTGTCCG 100
.|||||.||.||.||||||||||||||.||.||||||||.||||||||||
RBAM_019860__ 51 CATGGTGAAGCCGTTTGACGAACAGCCCGGGATTGAAAAGGTGGTGTCCG 100
BSNT_03236___ 101 GGTATACAGGCGGCCATACTGAAAACCCTACGTATGAAGAGGTGTGCAGT 150
|.||||||||.||.||||||||.||.||.||.||.|||||.|||||||||
RBAM_019860__ 101 GCTATACAGGAGGTCATACTGAGAATCCGACTTACGAAGAAGTGTGCAGT 150
BSNT_03236___ 151 GAAACGACGGGACATCGTGAAGCCGTTCAAATCACGTTTAATCCTG--AT 198
||||||||.|||||..|.|||||||||||||||||.|||.|.|||| ||
RBAM_019860__ 151 GAAACGACCGGACACAGAGAAGCCGTTCAAATCACATTTCAACCTGACAT 200
BSNT_03236___ 199 GTATTCCCTTATGAAAAACTGCTTGAATTATTTTGGCAGCAAATCGATCC 248
.||| ||.||||||||.||..|.||..|.|||||||||||.|||||.||
RBAM_019860__ 201 TTAT--CCGTATGAAAAGCTTGTCGAGCTGTTTTGGCAGCAGATCGACCC 248
BSNT_03236___ 249 GACAGATGCCGGGGGGCAATTTGCTGATCGCGGCAGTTCCTATCGCGCAG 298
|||.|||||.||.||.||.|||||.||.|||||.|||||.|||||.||.|
RBAM_019860__ 249 GACTGATGCAGGCGGCCAGTTTGCAGACCGCGGAAGTTCATATCGGGCGG 298
BSNT_03236___ 299 CCATTTTTTATCATAATGATAAACAAAAGGAGCTTGCGGAAGCTTCCAAG 348
|.||.|.|||.|||||||||.|||||||..|..|.||.|||||.||.||.
RBAM_019860__ 299 CGATATATTACCATAATGATGAACAAAAACAAATCGCTGAAGCCTCAAAA 348
BSNT_03236___ 349 CAACGTCTGGCTGAAAGCGGCATCTTTAAAGATCCGATTGTAACGGACAT 398
.|||..||.|..|||||||||||.||||||.|.|||||.||.||.|||||
RBAM_019860__ 349 AAACAGCTTGAAGAAAGCGGCATATTTAAAAAGCCGATCGTGACAGACAT 398
BSNT_03236___ 399 TTTAAAAGCTGAACCTTTCTATGAAGCGGAAGGCTACCATCAGCATTTTT 448
.||.||.|||||.|||||.|||||||||||||||||.||||||||.||||
RBAM_019860__ 399 CTTGAAGGCTGAGCCTTTTTATGAAGCGGAAGGCTATCATCAGCACTTTT 448
BSNT_03236___ 449 ATAAAAAGAATCCAGCACATTATCAGCGCTACCGGACAGGTTCCGGACGT 498
||||.||.|||||.|..||.||...|||||||||...|||||||||||||
RBAM_019860__ 449 ATAAGAAAAATCCTGATCACTACGGGCGCTACCGTGTAGGTTCCGGACGT 498
BSNT_03236___ 499 GCGGGGTTTATCAGTGAGCATTGGGGGGCTAAATAA 534
...||.|||.|...||||||||||.|||..|.||||
RBAM_019860__ 499 CAAGGCTTTCTGGATGAGCATTGGAGGGACAGATAA 534
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