Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03232 and RBAM_019840
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:20
# Commandline: needle
# -asequence pep-align/BSNT_03232.1.9828.seq
# -bsequence pep-align/RBAM_019840___ypqP.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03232-RBAM_019840___ypqP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03232-RBAM_019840___ypqP.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03232
# 2: RBAM_019840___ypqP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 341
# Identity: 175/341 (51.3%)
# Similarity: 185/341 (54.3%)
# Gaps: 145/341 (42.5%)
# Score: 920.0
#
#
#=======================================
BSNT_03232 1 MPKQQTAELKPFFHNKTVLVTGGTGSIGSQIVKRLLMLTPKQVIVFSKDD 50
RBAM_019840__ 0 -------------------------------------------------- 0
BSNT_03232 51 SKQYVMSQKYAEDKRLLFVLGDVRDHRRVNQVMKGVDIVFHAAALKQVPT 100
RBAM_019840__ 0 -------------------------------------------------- 0
BSNT_03232 101 CEDHPFEAIQTNLIGGQNVVEAALSHRVQHVINISTDKAVSPVNTMGATK 150
|||||
RBAM_019840__ 1 ---------------------------------------------MGATK 5
BSNT_03232 151 LLSEKLFHQANRHVQNKGTLFCSVRFGNVLGSRGSVIPILFEQMMEGEPL 200
|||||||||||.||||:||:|||||||||||||||||||||||:|.|.||
RBAM_019840__ 6 LLSEKLFHQANHHVQNRGTVFCSVRFGNVLGSRGSVIPILFEQLMAGGPL 55
BSNT_03232 201 TITDKNMTRFFMSIDDAATLTLQSAAITKGGETFIFKMESLKLEELIHGF 250
|||||||||||||||||||||||||||||||||||||||||:||||:|||
RBAM_019840__ 56 TITDKNMTRFFMSIDDAATLTLQSAAITKGGETFIFKMESLRLEELLHGF 105
BSNT_03232 251 EEYASQHGLPRPAAVEVGKRPGEKLHEELTSPHEIESLYEWGNLYAILPE 300
||||.:||||||||||||||||||||||||||||.|||||||||||||||
RBAM_019840__ 106 EEYAFRHGLPRPAAVEVGKRPGEKLHEELTSPHETESLYEWGNLYAILPE 155
BSNT_03232 301 PEKHPDFRKVNLPGYQSDQAPLITKERIAQIIEELHQEKKA 341
|.|||:|||||||.|||||||||||:.|.:|||.||:|||.
RBAM_019840__ 156 PAKHPEFRKVNLPRYQSDQAPLITKDTIVKIIERLHEEKKT 196
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