Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03094 and RBAM_019810
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:57
# Commandline: needle
# -asequence pep-align/BSNT_03094___yokK.1.9828.seq
# -bsequence pep-align/RBAM_019810___yokK.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03094___yokK-RBAM_019810___yokK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03094___yokK-RBAM_019810___yokK.aln
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#
# Aligned_sequences: 2
# 1: BSNT_03094___yokK
# 2: RBAM_019810___yokK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 196
# Identity: 73/196 (37.2%)
# Similarity: 109/196 (55.6%)
# Gaps: 22/196 (11.2%)
# Score: 331.0
#
#
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BSNT_03094___ 1 MSFNNVKQKLKEFLIDAKTDPRINKNEQLKEIEMNIGKQLPSDYKDFLKE 50
|....:|:|:.||.:|.:.|..||.::.||:.|......:..|||:||..
RBAM_019810__ 1 MGLQVIKKKMSEFNLDIRLDKNINSHQVLKKFEDENSFDISDDYKEFLNL 50
BSNT_03094___ 51 YGGCYLESKKTSDEIEYDVCYKPIEKDPWMGKGDDTQLLEGFYGLANDHD 100
||.|::| |.:|.:..:|.:|....|: ..|..||||.|:..
RBAM_019810__ 51 YGECWIE--------EDNVFFPVLEDNPLADNGN--LRLGYFYGLNNNDA 90
BSNT_03094___ 101 SLQKAIDTYSDRFPRNIIPIASSAGGNEICMDIDN---GKILFWDHELSH 147
::.|..:..|::.|..|||||...||::||:.:.. ||:.||||||::
RBAM_019810__ 91 NIIKLKEDLSEQMPDWIIPIADGDGGDQICLGVKGEAAGKVYFWDHELTN 140
BSNT_03094___ 148 PDKDFFLIANSFEEFVFSL-VDEPIEADKEDDGILYIE-------- 184
..||.||:||||.:|:.|| ::|..:.|.||||||.||
RBAM_019810__ 141 GVKDTFLVANSFSDFIQSLFIEETADEDDEDDGILSIELDDDLLNS 186
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