Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03229 and RBAM_019620

See DNA alignment / Visit BSNT_03229 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:20
# Commandline: needle
#    -asequence pep-align/BSNT_03229___cgeA.1.9828.seq
#    -bsequence pep-align/RBAM_019620___cgeA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03229___cgeA-RBAM_019620___cgeA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03229___cgeA-RBAM_019620___cgeA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03229___cgeA
# 2: RBAM_019620___cgeA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 143
# Identity:      74/143 (51.7%)
# Similarity:    91/143 (63.6%)
# Gaps:          40/143 (28.0%)
# Score: 359.5
# 
#
#=======================================

BSNT_03229___      1 -----------------------------------MDSNLKDLLEAAIDQ     15
                                                        :.:::|:|||||||.
RBAM_019620__      1 MSEDRLELKKNLLKTLLAPVFDNSALSGGTDGGDNVKNSVKELLEAAIDA     50

BSNT_03229___     16 RVDES---EMVTAESLLDP--SLPARWIFARVTPGTTISIVTDSGDMIGP     60
                     :|||:   :.::|:|:|..  ||.|||||||:.|||.||||.||||||||
RBAM_019620__     51 KVDEAAVKDSLSAQSVLGSGISLAARWIFARIQPGTVISIVMDSGDMIGP    100

BSNT_03229___     61 VVFVAFDQVHGIVFVTQESSVTPAGQATTLIDVDKVESVTFFS    103
                     |.|||||::|||||||||:||||||.||||:||||||||||.|
RBAM_019620__    101 VQFVAFDEIHGIVFVTQENSVTPAGSATTLLDVDKVESVTFTS    143


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