Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03228 and RBAM_019610

See DNA alignment / Visit BSNT_03228 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:20
# Commandline: needle
#    -asequence pep-align/BSNT_03228___cgeC.1.9828.seq
#    -bsequence pep-align/RBAM_019610___cgeC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03228___cgeC-RBAM_019610___cgeC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03228___cgeC-RBAM_019610___cgeC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03228___cgeC
# 2: RBAM_019610___cgeC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 101
# Identity:      69/101 (68.3%)
# Similarity:    83/101 (82.2%)
# Gaps:           2/101 ( 2.0%)
# Score: 332.5
# 
#
#=======================================

BSNT_03228___      1 MDLEKQVDREENQDELHFILLLLILLIRQSSSEGNPSDLRRQLVFAKELG     50
                     ||.|:.|.....::|...:||||:||.||.|  |:.||||||||.|||||
RBAM_019610__      1 MDSEETVKHGGFEEEFQLVLLLLLLLSRQPS--GDHSDLRRQLVMAKELG     48

BSNT_03228___     51 VPVSKVNLINGDTLQNVIVKEVLTDLVIFQNPLNNTRSHVSLSSVVSWGA    100
                     ||||:||||||.|||||||||||:||.:||||||:|||:|::||:|||||
RBAM_019610__     49 VPVSRVNLINGSTLQNVIVKEVLSDLAVFQNPLNHTRSNVAISSIVSWGA     98

BSNT_03228___    101 F    101
                     |
RBAM_019610__     99 F     99


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