Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03226 and RBAM_019600
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:20
# Commandline: needle
# -asequence pep-align/BSNT_03226___cgeD.1.9828.seq
# -bsequence pep-align/RBAM_019600___cgeD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03226___cgeD-RBAM_019600___cgeD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03226___cgeD-RBAM_019600___cgeD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03226___cgeD
# 2: RBAM_019600___cgeD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 426
# Identity: 252/426 (59.2%)
# Similarity: 321/426 (75.4%)
# Gaps: 3/426 ( 0.7%)
# Score: 1350.5
#
#
#=======================================
BSNT_03226___ 1 MGEKVSIILTSYNKPDYLQKAIESVIQQTHDLWELFIMDDHSNAETTAVI 50
|.:|:|||||||||||.:::|||||:.||:..||||:||||||.||:|.|
RBAM_019600__ 1 MEKKISIILTSYNKPDLVKQAIESVLHQTYRNWELFVMDDHSNEETSAAI 50
BSNT_03226___ 51 HKYLHDRRIQYHNSFVHPADRLKTARYATLINSALPFADGDYISYLTDDT 100
..|:.|.||.|.|||::||:|||:.|||.|||.||..|.|:||:||||||
RBAM_019600__ 51 STYIKDPRIYYDNSFINPAERLKSTRYAVLINDALSRAKGEYITYLTDDT 100
BSNT_03226___ 101 VYHPERLSRMMQEFSHKPEAQAVYSKQKVVHVNERGEEISHFYRNANAVL 150
|:||:|||||.:..:...|..||||.|||:|||.||.|..||||.|..||
RBAM_019600__ 101 VFHPDRLSRMAEALNQYSEFDAVYSSQKVIHVNGRGTEQFHFYRFAEEVL 150
BSNT_03226___ 151 DQAAFQVDHCSVMHRRSLLNLIHHKFGGYWDDDMKHWNHGDAIFWARLNN 200
|||||.|||||||||||||..:..|||.:||:|:.||||||::||:|:|.
RBAM_019600__ 151 DQAAFLVDHCSVMHRRSLLERVKEKFGSFWDEDVMHWNHGDSVFWSRINT 200
BSNT_03226___ 201 FTPFLPINEVLDTTYKTPDSFQNAYRFLPADLIDGSFVKGSDQNVYFFDQ 250
||.||||.||||||||||.||||.|:.||:.|||||||||:||.||..|:
RBAM_019600__ 201 FTSFLPIKEVLDTTYKTPHSFQNTYQSLPSVLIDGSFVKGTDQKVYQLDR 250
BSNT_03226___ 251 GVRHPVGEKWGFLYLNRTVAVPDPYLFQYRIGKILNIPNYILVKEADHPA 300
..|.||.|:|..||..|||.:|||:||||.....::|||:.||::..|
RBAM_019600__ 251 NKRKPVNERWHTLYEGRTVVIPDPFLFQYEEENSVSIPNFQLVRDQFH-- 298
BSNT_03226___ 301 IFYIEAGKKRRIVDQYAFQFYQFQRKDIVTIGKEEMETLPEGPPITWKRS 350
:::||.|:| |:||..||:||:|:|.||..:.::|::.||:||||:...|
RBAM_019600__ 299 VYFIEDGEK-RLVDHSAFRFYRFKRHDIPALERDEIQALPDGPPISRGTS 347
BSNT_03226___ 351 ELIKNPPGRRLFFIEREPFLFLNGVFHPISEQVTRKFFLHQKPISASFRN 400
..|::.|||.||.||:|.:::|.||.||||..|.::||.:||.|..||:.
RBAM_019600__ 348 GCIQHLPGRMLFRIEQEFYVYLRGVLHPISHDVAKRFFANQKAIPISFQQ 397
BSNT_03226___ 401 IQQFPIGKPFYPVYDEIIKKLNIATE 426
|:|.|||.|||||||||::.|||...
RBAM_019600__ 398 IKQLPIGMPFYPVYDEIMRNLNITKG 423
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