Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03221 and RBAM_019560

See DNA alignment / Visit BSNT_03221 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:19
# Commandline: needle
#    -asequence pep-align/BSNT_03221___yodS.1.9828.seq
#    -bsequence pep-align/RBAM_019560___yodS.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03221___yodS-RBAM_019560___yodS.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03221___yodS-RBAM_019560___yodS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03221___yodS
# 2: RBAM_019560___yodS
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 229
# Identity:     179/229 (78.2%)
# Similarity:   204/229 (89.1%)
# Gaps:           0/229 ( 0.0%)
# Score: 945.0
# 
#
#=======================================

BSNT_03221___      1 MAPFQKAISIDTAIADVRDGSVLMFGGFGGVGSPPSLIEAILDSGITDLT     50
                     |:.|.|.|.|..|||||:|.||:|||||||||||||||||||:||:.:||
RBAM_019560__      1 MSIFHKKIDIHEAIADVKDESVIMFGGFGGVGSPPSLIEAILESGVKELT     50

BSNT_03221___     51 VICNDAGFPDIGIGPLIVNQRVKTLIASHIGSNPVAGKQMTEGTLEVQFS    100
                     |||||||||:||||||||::|||.|||||||||||||:|||:|.|||:||
RBAM_019560__     51 VICNDAGFPEIGIGPLIVHKRVKRLIASHIGSNPVAGRQMTDGALEVEFS    100

BSNT_03221___    101 PQGTLAERIRAGGAGLGGILTDVGIDNPMVCEKKDIVTVAGKRYLIEEAL    150
                     ||||||||||||||||||||||:||||..|||.|:.||:.||.||:|:||
RBAM_019560__    101 PQGTLAERIRAGGAGLGGILTDIGIDNATVCENKETVTIDGKSYLVEKAL    150

BSNT_03221___    151 TADFAFINAYIADEFGNLTYDKTARNMNPLMAMAARRTFAEAERIVPMGE    200
                     ||||||::|:.||||||||:||||||||||||.||.||||||..|||.||
RBAM_019560__    151 TADFAFVSAHTADEFGNLTFDKTARNMNPLMAAAAERTFAEAAEIVPAGE    200

BSNT_03221___    201 ISEEMIVTPGVFVKGVVRSEGVKWKWAWE    229
                     :..|.||||||||:|||:||||||:||||
RBAM_019560__    201 LDSEHIVTPGVFVEGVVQSEGVKWRWAWE    229


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