Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03221 and RBAM_019560
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:19
# Commandline: needle
# -asequence dna-align/BSNT_03221___yodS.1.9828.seq
# -bsequence dna-align/RBAM_019560___yodS.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03221___yodS-RBAM_019560___yodS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03221___yodS-RBAM_019560___yodS.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03221___yodS
# 2: RBAM_019560___yodS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 701
# Identity: 525/701 (74.9%)
# Similarity: 525/701 (74.9%)
# Gaps: 22/701 ( 3.1%)
# Score: 1903.0
#
#
#=======================================
BSNT_03221___ 1 ATGGCGCCATTTCAAAAAGCAATCAGCATTGACACAGCAATTGCAGATGT 50
|||.|....|||||.|||..||||...|||.|...|||||||||.|||||
RBAM_019560__ 1 ATGTCTATTTTTCATAAAAAAATCGATATTCATGAAGCAATTGCCGATGT 50
BSNT_03221___ 51 TCGGGATGGATCGGTTCTGATGTTTGGCGGTTTTGGGGGAGTCGGGTCGC 100
...|||.|.|||.||..|.|||||.|||||||||||||||||.||.||.|
RBAM_019560__ 51 CAAGGACGAATCTGTCATCATGTTCGGCGGTTTTGGGGGAGTGGGTTCAC 100
BSNT_03221___ 101 CTCCTTCATTGATTGAAGCGATATTGGACAGCGGTATAACGGATTTAACT 150
||||.|||||.||.||||||||.|||||.|||||..|.|..||..|.||.
RBAM_019560__ 101 CTCCGTCATTAATAGAAGCGATTTTGGAAAGCGGCGTTAAAGAGCTGACC 150
BSNT_03221___ 151 GTGATTTGCAATGACGCCGGTTTCCCGGATATAGGGATCGGCCCGCTTAT 200
||.||.||||||||.|||||.||.|||||.||.||.||||||||||||||
RBAM_019560__ 151 GTCATCTGCAATGATGCCGGATTTCCGGAAATCGGCATCGGCCCGCTTAT 200
BSNT_03221___ 201 TGTTAATCAACGGGTCAAAACCCTGATCGCCTCGCATATAGGTTCCAATC 250
.|||.||.|||||||.||||..||||||||.||.|||||.||.||.||||
RBAM_019560__ 201 CGTTCATAAACGGGTAAAAAGGCTGATCGCTTCCCATATCGGCTCAAATC 250
BSNT_03221___ 251 CTGTAGCCGGAAAACAGATGACAGAGGGGACGTTAGAGGTTCAATTTTCA 300
||||.||.||.|.|||.|||||.||.||..||.|.|||||..|||||||.
RBAM_019560__ 251 CTGTCGCGGGCAGACAAATGACTGACGGAGCGCTTGAGGTGGAATTTTCG 300
BSNT_03221___ 301 CCTCAGGGAACGCTTGCGGAACGGATTCGCGCTGGCGGAGCGGGACTTGG 350
||.||.||.||||||||.||||||||||||||.|||||||||||.||.||
RBAM_019560__ 301 CCGCAAGGGACGCTTGCTGAACGGATTCGCGCAGGCGGAGCGGGGCTAGG 350
BSNT_03221___ 351 CGGTATTTTAACCGATGTGGGCATTGATAATCCAATGGTTTGCGAAAAAA 400
||||||||||||.|||.|.|||||||||||..|||..|||||.|||||.|
RBAM_019560__ 351 CGGTATTTTAACTGATATCGGCATTGATAACGCAACCGTTTGTGAAAACA 400
BSNT_03221___ 401 AGGACATCGTAAC-AGTGGCGGGAAAACGATACTTGATTGAAGAGGCGCT 449
|.||.|.|||||| |.||.| |||||....||.||..|||||.|.|||||
RBAM_019560__ 401 AAGAAACCGTAACGATTGAC-GGAAAGTCCTATTTAGTTGAAAAAGCGCT 449
BSNT_03221___ 450 GACGGCTGATTTTGCTTTTATCAATGCTTACAT--TGCAGATGAATTCGG 497
|||.||||||||.||||||.|...||| |||| |||.|||||||||||
RBAM_019560__ 450 GACTGCTGATTTCGCTTTTGTGTCTGC--ACATACTGCTGATGAATTCGG 497
BSNT_03221___ 498 CAATCTAACGTATGACAAAACCGCGCGCAATATGAATCCGCTTATGGCAA 547
.|||||.||||.|||||||||.||||||||.|||||.||.||.|||||..
RBAM_019560__ 498 GAATCTGACGTTTGACAAAACGGCGCGCAACATGAACCCTCTGATGGCTG 547
BSNT_03221___ 548 TGGCCGCCAGGAGAACCTTTGCCGA---AGCTGAGCGTATCGTTCCGATG 594
.|||.|||...|||||.|||||.|| |||.||| ||.||.|| ||
RBAM_019560__ 548 CGGCGGCCGAAAGAACATTTGCTGAGGCAGCAGAG---ATTGTGCC--TG 592
BSNT_03221___ 595 GGGGAGATTTCTGA-----AGAAATGATTGTCACACCGGGGGTTTTTGTT 639
..||.||..| ||| ||.| .|||||.||.|||||.|||||.||.
RBAM_019560__ 593 CCGGCGAACT-TGACAGCGAGCA--TATTGTAACGCCGGGCGTTTTCGTG 639
BSNT_03221___ 640 AAGGGGGTTGTACGAAGCGAGGGAGTGAAGTGGAAATGGGCTTGGGAGTA 689
.||||.||.||.|.|||.||.|||||||||||||.||||||||||||.||
RBAM_019560__ 640 GAGGGTGTCGTGCAAAGTGAAGGAGTGAAGTGGAGATGGGCTTGGGAATA 689
BSNT_03221___ 690 G 690
|
RBAM_019560__ 690 G 690
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