Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03220 and RBAM_019550
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:18
# Commandline: needle
# -asequence pep-align/BSNT_03220___yodR.1.9828.seq
# -bsequence pep-align/RBAM_019550___yodR.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03220___yodR-RBAM_019550___yodR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03220___yodR-RBAM_019550___yodR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03220___yodR
# 2: RBAM_019550___yodR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 231
# Identity: 166/231 (71.9%)
# Similarity: 189/231 (81.8%)
# Gaps: 14/231 ( 6.1%)
# Score: 853.0
#
#
#=======================================
BSNT_03220___ 1 MGLGVAEREQIAKRAATEIKQGMIVNLGIGIPSLVPNFLKPDMQVMFQAE 50
||||:||||.||:|||:|:..||||||||||||||||||...|:||.|||
RBAM_019550__ 1 MGLGIAERESIARRAASEVTSGMIVNLGIGIPSLVPNFLPAGMEVMLQAE 50
BSNT_03220___ 51 NGVLGIGESPEKGEEDAHLCNAAGYPVRAVKGASYFDTTMSFAMIRKGKI 100
|||||||.|||:||||..||||||:||..||||||||:.:||||||||.|
RBAM_019550__ 51 NGVLGIGGSPERGEEDELLCNAAGFPVSTVKGASYFDSALSFAMIRKGLI 100
BSNT_03220___ 101 DITILGALQVSQSGDLANWLVPGKKVPGMGGAMELAQKAKKVVVVMSHTD 150
|||||||||||::||||||||||||||||||||||||.||||||||||||
RBAM_019550__ 101 DITILGALQVSRTGDLANWLVPGKKVPGMGGAMELAQGAKKVVVVMSHTD 150
BSNT_03220___ 151 QKGRPKLTERCTLPLTAAGCVDLIITEKAVLEVDSHHFILKELMNGSTID 200
|||||||.|.|:||||||||.|||||||||:.:|...|:|:||:||:|||
RBAM_019550__ 151 QKGRPKLVESCSLPLTAAGCADLIITEKAVISIDDGAFVLEELLNGTTID 200
BSNT_03220___ 201 EVTRLTEAEIKIDMPFS-------------- 217
:|.:.|:|||::...|.
RBAM_019550__ 201 DVIQTTDAEIRLGECFLKRGSVHGSIRRESH 231
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