Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03215 and RBAM_019520
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:17
# Commandline: needle
# -asequence pep-align/BSNT_03215___kamA.1.9828.seq
# -bsequence pep-align/RBAM_019520___kamA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03215___kamA-RBAM_019520___kamA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03215___kamA-RBAM_019520___kamA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03215___kamA
# 2: RBAM_019520___kamA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 473
# Identity: 424/473 (89.6%)
# Similarity: 454/473 (96.0%)
# Gaps: 2/473 ( 0.4%)
# Score: 2302.5
#
#
#=======================================
BSNT_03215___ 1 MKNKWYKPKRHWKEIELWKDVPEEKWNDWLWQLTHTVRTLDDLKKVINLT 50
|.|||::||||||||||||||||:|||||||||||||||:|||||||:||
RBAM_019520__ 1 MTNKWFQPKRHWKEIELWKDVPEDKWNDWLWQLTHTVRTVDDLKKVIHLT 50
BSNT_03215___ 51 EDEEEGVRISTKTIPLNITPYYASLMDPDNPRCPVRMQSVPLSEEMHKTK 100
|:||||||:|.|||||||||||||||||||||||:|||||||||||||||
RBAM_019520__ 51 EEEEEGVRMSVKTIPLNITPYYASLMDPDNPRCPIRMQSVPLSEEMHKTK 100
BSNT_03215___ 101 YDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSGQI 150
|||||||.||||||||||||||||||||||||||||||||||||||||||
RBAM_019520__ 101 YDLEDPLFEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSGQI 150
BSNT_03215___ 151 GMGVPKKQLDAAIAYIRETPEIRDCLISGGDGLLINDQILEYILKELRSI 200
|||||||||||||||||||||||||||||||||||||||||||||.||.|
RBAM_019520__ 151 GMGVPKKQLDAAIAYIRETPEIRDCLISGGDGLLINDQILEYILKNLRDI 200
BSNT_03215___ 201 PHLEVIRIGTRAPVVFPQRITDHLCEILKKYHPVWLNTHFNTSIEMTEES 250
||||:|||||||||||||||||:||||||||||||||||||||||:||||
RBAM_019520__ 201 PHLEIIRIGTRAPVVFPQRITDNLCEILKKYHPVWLNTHFNTSIELTEES 250
BSNT_03215___ 251 VEACEKLVNAGVPVGNQAVVLAGINDSVPIMKKLMHDLVKIRVRPYYIYQ 300
|.|||||||||||||||||:||||||||||||||||||||||||||||||
RBAM_019520__ 251 VAACEKLVNAGVPVGNQAVILAGINDSVPIMKKLMHDLVKIRVRPYYIYQ 300
BSNT_03215___ 301 CDLSEGIGHFRAPVSKGLEIIEGLRGHTSGYAVPTFVVDAPGGGGKIALQ 350
||||||||||||||||||||||||||||:|:|||||||||||||||||||
RBAM_019520__ 301 CDLSEGIGHFRAPVSKGLEIIEGLRGHTTGFAVPTFVVDAPGGGGKIALQ 350
BSNT_03215___ 351 PNYVLSQSPDKVTLRNFEGVITSYPEPENYIPNQADAYFESVFPETADKK 400
|||:|||||:||.:||||||||||||||||||||||.|||||||.|..|:
RBAM_019520__ 351 PNYLLSQSPEKVVIRNFEGVITSYPEPENYIPNQADDYFESVFPGTMAKR 400
BSNT_03215___ 401 EPIGLSAIFADKEVSFTPENVDRIKRREAYIANPEHETLKDRREKRDQLK 450
||:||||||||||||||||||.||.||:.:.:||:||||||||||||:||
RBAM_019520__ 401 EPVGLSAIFADKEVSFTPENVSRIDRRKTFTSNPDHETLKDRREKRDELK 450
BSNT_03215___ 451 EKKFLAQQKKQKE--TECGGDSS 471
||||:|||||::: :|.||:|.
RBAM_019520__ 451 EKKFIAQQKKEQKAGSEVGGESP 473
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