Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03208 and RBAM_019470

See DNA alignment / Visit BSNT_03208 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:15
# Commandline: needle
#    -asequence pep-align/BSNT_03208.1.9828.seq
#    -bsequence pep-align/RBAM_019470.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03208-RBAM_019470.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03208-RBAM_019470.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03208
# 2: RBAM_019470
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 47
# Identity:      27/47 (57.4%)
# Similarity:    35/47 (74.5%)
# Gaps:           0/47 ( 0.0%)
# Score: 148.0
# 
#
#=======================================

BSNT_03208         1 MIAKMMEALDGERFDIIMEKTLKGMTRVMIWGCLPYFLYVLIRMFTN     47
                     |:.|||..|||:.|||::||.||||:.|:..||||:||||.:|.|..
RBAM_019470        1 MMTKMMALLDGDGFDIVLEKVLKGMSFVIFAGCLPWFLYVTVRFFAG     47


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