Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03206 and RBAM_019460

See DNA alignment / Visit BSNT_03206 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:15
# Commandline: needle
#    -asequence pep-align/BSNT_03206___yozD.1.9828.seq
#    -bsequence pep-align/RBAM_019460___yozD.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03206___yozD-RBAM_019460___yozD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03206___yozD-RBAM_019460___yozD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03206___yozD
# 2: RBAM_019460___yozD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 58
# Identity:      48/58 (82.8%)
# Similarity:    55/58 (94.8%)
# Gaps:           1/58 ( 1.7%)
# Score: 258.0
# 
#
#=======================================

BSNT_03206___      1 MKEIDLVIDTEEIAEFFYRELARRGYIPSEDELFEIADITFDYLIEKCMI     50
                     ||||||||||||||::||.:||.|||||||:|:|||||||||||:|||||
RBAM_019460__      1 MKEIDLVIDTEEIADYFYSQLAMRGYIPSEEEIFEIADITFDYLLEKCMI     50

BSNT_03206___     51 NEELDEDE     58
                     :|||||| 
RBAM_019460__     51 DEELDED-     57


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