Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03206 and RBAM_019460
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:15
# Commandline: needle
# -asequence dna-align/BSNT_03206___yozD.1.9828.seq
# -bsequence dna-align/RBAM_019460___yozD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03206___yozD-RBAM_019460___yozD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03206___yozD-RBAM_019460___yozD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03206___yozD
# 2: RBAM_019460___yozD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 178
# Identity: 147/178 (82.6%)
# Similarity: 147/178 (82.6%)
# Gaps: 5/178 ( 2.8%)
# Score: 621.0
#
#
#=======================================
BSNT_03206___ 1 ATGAAAGAAATAGATCTTGTGATTGATACGGAAGAAATCGCTGAATTTTT 50
||||||||||||||||||||||||||.||.||||||||.|||||.|.|||
RBAM_019460__ 1 ATGAAAGAAATAGATCTTGTGATTGACACAGAAGAAATAGCTGATTATTT 50
BSNT_03206___ 51 TTACAGAGAGCTTGCAAGACGGGGCTACATACCGAGTGAGGATGAGCTGT 100
||||||..|||||||.|..||.||.||||||||||||||.||.||..|.|
RBAM_019460__ 51 TTACAGTCAGCTTGCTATGCGCGGGTACATACCGAGTGAAGAGGAAATCT 100
BSNT_03206___ 101 TTGAAATCGCTGATATCACCTTTGATTATTTGATAGAAAAATGTATGATA 150
|.|||||.||.||.|||||||||||||||||..|||||||||||||||||
RBAM_019460__ 101 TCGAAATAGCCGACATCACCTTTGATTATTTATTAGAAAAATGTATGATA 150
BSNT_03206___ 151 AATGAAGAGCTGGATGAAGA-TGAGTGA 177
.|.||||||||.|||||||| |||
RBAM_019460__ 151 GACGAAGAGCTTGATGAAGACTGA---- 174
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