Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03205 and RBAM_019450
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:13
# Commandline: needle
# -asequence pep-align/BSNT_03205___yodM.1.9828.seq
# -bsequence pep-align/RBAM_019450___yodM.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03205___yodM-RBAM_019450___yodM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03205___yodM-RBAM_019450___yodM.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03205___yodM
# 2: RBAM_019450___yodM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 203
# Identity: 114/203 (56.2%)
# Similarity: 148/203 (72.9%)
# Gaps: 0/203 ( 0.0%)
# Score: 593.0
#
#
#=======================================
BSNT_03205___ 1 MYKPVSLFLFFLILAAAIHTNAVQSADEAISKAAVLIRQPWLNEVMTGIT 50
||||.|||..|::|||||...||:..||.:.:|||.||..||||:|..||
RBAM_019450__ 1 MYKPASLFALFILLAAAIRIEAVRVFDERVIEAAVRIRAAWLNELMLWIT 50
BSNT_03205___ 51 HLGASSFLLPLIVIIGAGMFFYRKTWDGLLMLLVFGTDRLLNKVLKEWIE 100
.||.::.||||:::.||.::.|:||.|.:.:.|:|..:|::|..:||.||
RBAM_019450__ 51 ELGTTAVLLPLLLLTGAALYMYKKTPDVVFLPLLFLIERIVNIKIKELIE 100
BSNT_03205___ 101 RVRPDFAPLVHESSFSFPSGHSMNAACVYPVIAYFLVKHLPFLSKHKKMV 150
|.||.|.|||||:|:|||||||||:|.:||||.|||:||:||.:|.|:.|
RBAM_019450__ 101 RARPAFEPLVHETSYSFPSGHSMNSAVMYPVIGYFLIKHVPFFTKRKRAV 150
BSNT_03205___ 151 YIIAGVIAVLVGISRVYLGVHFVTDVLGGFSLGLLLFFLVKGFDEKIKRF 200
.:..||:.:|:|.||:|||.||.||||.||||||.|..|...||||...|
RBAM_019450__ 151 TVFTGVLVILIGFSRIYLGAHFPTDVLAGFSLGLCLVSLFALFDEKYHPF 200
BSNT_03205___ 201 RQK 203
|||
RBAM_019450__ 201 RQK 203
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