Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03204 and RBAM_019440

See DNA alignment / Visit BSNT_03204 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:13
# Commandline: needle
#    -asequence pep-align/BSNT_03204___yodL.1.9828.seq
#    -bsequence pep-align/RBAM_019440___yodL.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03204___yodL-RBAM_019440___yodL.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03204___yodL-RBAM_019440___yodL.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03204___yodL
# 2: RBAM_019440___yodL
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 106
# Identity:      80/106 (75.5%)
# Similarity:    89/106 (84.0%)
# Gaps:           3/106 ( 2.8%)
# Score: 424.0
# 
#
#=======================================

BSNT_03204___      1 ---MLSVFKKKSCSYDVTIFQTPRFGEKKGYRAVYRTELNGSDHQDVLKR     47
                        .|.|||||.|:||||||||||:|||||||.||||||...:|||.|:|
RBAM_019440__      1 MLLSLPVFKKKICAYDVTIFQTPRYGEKKGYRVVYRTELAADNHQDALER     50

BSNT_03204___     48 AFSLFNVFDTVPSDYDARFMATGDVILIDEGRKGKTYYQLLPAGWRKINR     97
                     |||:|||.||||:||.|||:||||||||||||||||||:|.||||.||||
RBAM_019440__     51 AFSVFNVPDTVPNDYQARFIATGDVILIDEGRKGKTYYRLNPAGWSKINR    100

BSNT_03204___     98 LIVQTT    103
                     |:||..
RBAM_019440__    101 LLVQPR    106


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