Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03200 and RBAM_019420
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:12
# Commandline: needle
# -asequence pep-align/BSNT_03200___deoD.1.9828.seq
# -bsequence pep-align/RBAM_019420___deoD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03200___deoD-RBAM_019420___deoD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03200___deoD-RBAM_019420___deoD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03200___deoD
# 2: RBAM_019420___deoD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 233
# Identity: 208/233 (89.3%)
# Similarity: 221/233 (94.8%)
# Gaps: 1/233 ( 0.4%)
# Score: 1073.0
#
#
#=======================================
BSNT_03200___ 1 MSVHIGAEKGQIADTVLLPGDPLRAKFIAETYLENVECYNEVRGMYGFTG 50
|||||.||||||||||||||||||||||||||||||||||||||||||||
RBAM_019420__ 1 MSVHINAEKGQIADTVLLPGDPLRAKFIAETYLENVECYNEVRGMYGFTG 50
BSNT_03200___ 51 TYKGKKISVQGTGMGVPSISIYVNELIQSFDVQNLIRVGSCGAIRKDVKV 100
||.|||:||||||||||||||||||||||:|||||||||||||||.||||
RBAM_019420__ 51 TYNGKKVSVQGTGMGVPSISIYVNELIQSYDVQNLIRVGSCGAIRNDVKV 100
BSNT_03200___ 101 RDVILAMTSSTDSQMNRVAFGSIDFAPCADFELLKNAYDAAKDKGVPVTV 150
||||||||||||||||||||||:|:|||||||||..||..|:...:||.|
RBAM_019420__ 101 RDVILAMTSSTDSQMNRVAFGSVDYAPCADFELLNKAYQEAQKNNLPVAV 150
BSNT_03200___ 151 GSVFTADQFYNDDSQIEKLAKYGVLGVEMETTALYTLAAKHGRKALSILT 200
|||||||||||:||||||||:|||||||||||||||||||:|:|||||||
RBAM_019420__ 151 GSVFTADQFYNEDSQIEKLARYGVLGVEMETTALYTLAAKYGKKALSILT 200
BSNT_03200___ 201 VSDHVLTGEETTAEERQTTFHDMIEVALHSVSQ 233
||||||||||||||||||||||||::|||:||
RBAM_019420__ 201 VSDHVLTGEETTAEERQTTFHDMIKLALHTVS- 232
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