Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03200 and RBAM_019420
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:12
# Commandline: needle
# -asequence dna-align/BSNT_03200___deoD.1.9828.seq
# -bsequence dna-align/RBAM_019420___deoD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03200___deoD-RBAM_019420___deoD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03200___deoD-RBAM_019420___deoD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03200___deoD
# 2: RBAM_019420___deoD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 706
# Identity: 569/706 (80.6%)
# Similarity: 569/706 (80.6%)
# Gaps: 11/706 ( 1.6%)
# Score: 2289.5
#
#
#=======================================
BSNT_03200___ 1 ATGAGTGTACATATAGGTGCTGAAAAAGGACAAATTGCGGATACAGTGCT 50
|||||||||||||||...||.||||||||.||||||||||||||||||||
RBAM_019420__ 1 ATGAGTGTACATATAAACGCAGAAAAAGGCCAAATTGCGGATACAGTGCT 50
BSNT_03200___ 51 TTTGCCGGGAGATCCTCTCAGAGCAAAATTTATTGCAGAAACGTATCTTG 100
|||||||||||||||.|||.||||.|||||||||||.|||||.|||||||
RBAM_019420__ 51 TTTGCCGGGAGATCCGCTCCGAGCGAAATTTATTGCGGAAACTTATCTTG 100
BSNT_03200___ 101 AAAATGTAGAATGCTACAATGAAGTCAGAGGCATGTATGGATTTACGGGT 150
|||||||.||||||||.||||||||||||||.|||||.||||||||||||
RBAM_019420__ 101 AAAATGTGGAATGCTATAATGAAGTCAGAGGAATGTACGGATTTACGGGT 150
BSNT_03200___ 151 ACATATAAAGGTAAAAAAATCTCAGTACAAGGCACGGGAATGGGTGTTCC 200
||||||||.||.||||||.|.|||||.||||||||.||.|||||||||||
RBAM_019420__ 151 ACATATAACGGCAAAAAAGTATCAGTCCAAGGCACCGGCATGGGTGTTCC 200
BSNT_03200___ 201 GTCTATTTCAATTTATGTGAATGAATTAATTCAAAGCTTCGATGTGCAAA 250
||||||.||.|||||||||||||||.|.||||||||||..|||||.||||
RBAM_019420__ 201 GTCTATCTCTATTTATGTGAATGAACTGATTCAAAGCTATGATGTTCAAA 250
BSNT_03200___ 251 ATCTAATAAGAGTCGGTTCTTGCGGCGCTATTCGTAAAGATGTCAAAGTG 300
|..||||.||||||||.||.|||||.||.||.|||||.||.||.||.|||
RBAM_019420__ 251 ACTTAATCAGAGTCGGCTCATGCGGAGCCATCCGTAATGACGTGAAGGTG 300
BSNT_03200___ 301 CGAGACGTCATTTTGGCGATGACCTCCTCAACTGATTCACAAATGAACAG 350
||.|||||.||||||||.|||||.||.||||||||||||||.||||||.|
RBAM_019420__ 301 CGTGACGTGATTTTGGCTATGACGTCTTCAACTGATTCACAGATGAACCG 350
BSNT_03200___ 351 AGTCGCTTTTGGAAGCATTGATTTTGCGCCTTGCGCAGATTTCGAGCT-T 399
.|||||.||.||.||..|.||||.|||.|||||||||||.|||||.|| .
RBAM_019420__ 351 TGTCGCCTTCGGCAGTGTAGATTATGCTCCTTGCGCAGACTTCGAACTGC 400
BSNT_03200___ 400 TTAAAAAATGC---CTATGATGCCGCAAAGGATAAAGGTGTGCCGGTGAC 446
||||.||| || |.|.||.| |||||| |.||...|.|.||.||..|
RBAM_019420__ 401 TTAATAAA-GCGTACCAGGAAG-CGCAAA--AAAACAATCTTCCCGTAGC 446
BSNT_03200___ 447 TGTAGGAAGCGTATTTACAGCTGACCAGTTCTACAACGACGATTCGCAAA 496
.||.|||||||||||.||.||.||.|||||.|||||.||.||.||.||||
RBAM_019420__ 447 GGTCGGAAGCGTATTCACTGCCGATCAGTTTTACAATGAAGACTCCCAAA 496
BSNT_03200___ 497 TTGAAAAACTTGCAAAATACGGTGTGCTTGGCGTTGAAATGGAAACAACT 546
|.|||||.|||||.|.||||||.||.||.|||||.||.||||||||.|||
RBAM_019420__ 497 TCGAAAAGCTTGCCAGATACGGCGTTCTCGGCGTAGAGATGGAAACGACT 546
BSNT_03200___ 547 GCATTGTATACATTAGCAGCGAAGCACGGAAGAAAAGCCCTGTCAATTCT 596
||.||.|||||..|.||.||.||..||||.|.||||||.|||||.||.||
RBAM_019420__ 547 GCTTTATATACGCTTGCCGCTAAATACGGCAAAAAAGCGCTGTCTATCCT 596
BSNT_03200___ 597 CACCGTGAGTGATCACGTATTAACAGGAGAAGAAACGACAGCGGAAGAGC 646
.||.||.||.||||||||||||||.|||||||||||.||.||.|||||||
RBAM_019420__ 597 GACTGTAAGCGATCACGTATTAACGGGAGAAGAAACAACGGCAGAAGAGC 646
BSNT_03200___ 647 GTCAAACGACATTTCATGATATGATAGAAGTGGCTTTACATTCCGTATCA 696
||||||||||.||||||||||||||..||.||||..|.|||.|.|||||.
RBAM_019420__ 647 GTCAAACGACTTTTCATGATATGATTAAACTGGCGCTGCATACTGTATCG 696
BSNT_03200___ 697 CAATAA 702
.||
RBAM_019420__ 697 TAA--- 699
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