Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03192 and RBAM_019340
See
DNA alignment /
Visit
BSNT_03192 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:05
# Commandline: needle
# -asequence pep-align/BSNT_03192___yodF.1.9828.seq
# -bsequence pep-align/RBAM_019340___yodF.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03192___yodF-RBAM_019340___yodF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03192___yodF-RBAM_019340___yodF.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03192___yodF
# 2: RBAM_019340___yodF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 496
# Identity: 448/496 (90.3%)
# Similarity: 466/496 (94.0%)
# Gaps: 0/496 ( 0.0%)
# Score: 2265.0
#
#
#=======================================
BSNT_03192___ 1 MQGNLTALLITAIIVLTVVCIGFLAGRDKSSRTSVEEWSVGGRRFGGLLV 50
|..|:|||:|||:||||||||||:||||||||||||||||||||||||||
RBAM_019340__ 1 MPANITALIITAVIVLTVVCIGFIAGRDKSSRTSVEEWSVGGRRFGGLLV 50
BSNT_03192___ 51 WFLVGADLYTAYTFLGLTSTAFTGGSVAFFAIPYSVLAYFIAYFFLPKLW 100
|||||||||||||||||||||:||||||||||||||||||||||||||||
RBAM_019340__ 51 WFLVGADLYTAYTFLGLTSTAYTGGSVAFFAIPYSVLAYFIAYFFLPKLW 100
BSNT_03192___ 101 NVAKIHKLTTLADYARERFNSKLLASLVAIVGVLMLIPYICLQLSGIQDT 150
.||||||||||||||||||:||||||||||||||||||||||||||||||
RBAM_019340__ 101 KVAKIHKLTTLADYARERFDSKLLASLVAIVGVLMLIPYICLQLSGIQDT 150
BSNT_03192___ 151 LQVAGTGYINVKFVVIISFILVALYTFFSGIKGPTYTAIIKDILVWVIML 200
|||||||.|||..||||||||||||||||||||||:||||||||||||||
RBAM_019340__ 151 LQVAGTGVINVNMVVIISFILVALYTFFSGIKGPTFTAIIKDILVWVIML 200
BSNT_03192___ 201 FMVVSLPLIHFNGWTPMIDTLVKEAPQMLTIPAEGPKGIPWFITASIVSA 250
|||||||||||:||||||.||.::||||||||..||||||||||||||||
RBAM_019340__ 201 FMVVSLPLIHFHGWTPMIHTLAEKAPQMLTIPDSGPKGIPWFITASIVSA 250
BSNT_03192___ 251 LALFMWAHAATGVFTAKSADAVRKNSMFLPLYNIVLILVIFLGFIAFLIL 300
||||||||||||||||||||||||||||||||||||||||||||||||:|
RBAM_019340__ 251 LALFMWAHAATGVFTAKSADAVRKNSMFLPLYNIVLILVIFLGFIAFLVL 300
BSNT_03192___ 301 PEDTNPRLALLHLIQTSYGGVAQGFAYATIALASLIPCSIMAIGASNLFA 350
|||||||||||.|||||||||||||||:||||||||||||||||||||||
RBAM_019340__ 301 PEDTNPRLALLKLIQTSYGGVAQGFAYSTIALASLIPCSIMAIGASNLFA 350
BSNT_03192___ 351 NNLYRDLIHPNVSQSKLTLVTRSMVFVVIGLALLFGMLFPTALVTLQLLG 400
|||||||||||||.||||::||||||||||||||||||||||||||||||
RBAM_019340__ 351 NNLYRDLIHPNVSPSKLTMITRSMVFVVIGLALLFGMLFPTALVTLQLLG 400
BSNT_03192___ 401 VSGMVQIFPAIAVSLFWKHQTKEATVIGLLVGLAVTFIVYTTQSAHGIYE 450
||||||||||||||||||:||||||:|||||||.|||.|..|||||||||
RBAM_019340__ 401 VSGMVQIFPAIAVSLFWKNQTKEATIIGLLVGLIVTFTVNITQSAHGIYE 450
BSNT_03192___ 451 GFWGLAANMIAVVILNPLFVKNAGSNPVIEGLFGKKQDANPNQKGA 496
|||||.|||.||:||||.|||.|.||.|.:|||.|......|||||
RBAM_019340__ 451 GFWGLTANMAAVIILNPFFVKKAASNAVKDGLFNKAPSDQLNQKGA 496
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.