Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03186 and RBAM_019330

See DNA alignment / Visit BSNT_03186 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:04
# Commandline: needle
#    -asequence pep-align/BSNT_03186.1.9828.seq
#    -bsequence pep-align/RBAM_019330___yodE.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03186-RBAM_019330___yodE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03186-RBAM_019330___yodE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03186
# 2: RBAM_019330___yodE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 307
# Identity:     133/307 (43.3%)
# Similarity:   163/307 (53.1%)
# Gaps:         111/307 (36.2%)
# Score: 730.0
# 
#
#=======================================

BSNT_03186         0 --------------------------------------------------      0
                                                                       
RBAM_019330__      1 MNTQGLHHVTAFAKDPAENLRFYTEVLGLRLVKKTVNFDDPATYHFYFGN     50

BSNT_03186         0 --------------------------------------------------      0
                                                                       
RBAM_019330__     51 QNGEPGTIITFFPFQGSRPGTVGKGQAGRIYFSVPKGALAFWKRRLEENG    100

BSNT_03186         1 -------MFGEKGLIFDDTEDLPLAIMEDAKSGKSEWTPDGITTNEAITG     43
                            |..|:.|:|:||||||||||||.:||:|||||.|||..:||||
RBAM_019330__    101 LSVKEQIMLSEQVLLFNDTEDLPLAIMEDERSGQSEWTPAGITEKDAITG    150

BSNT_03186        44 MKGVLLYSYDPQATIQLLTESFGYTKVAEEDQIVRLATSAAVGGVIDVHL     93
                     |:|||||||.|:|||:.|.|.|||:|..||.|||||.:.|.:|.:|||.|
RBAM_019330__    151 MRGVLLYSYRPEATIKFLIERFGYSKTGEEHQIVRLQSEARIGHIIDVDL    200

BSNT_03186        94 HPEKRGVGGYGTVHHIAFRTKKNEQAKWLPIIAENHLPSSEILDREYFTS    143
                     .|::.|:||||||||:||||.:.|||:|..|:|::||.||:||||.||||
RBAM_019330__    201 APKEAGIGGYGTVHHVAFRTSEKEQAEWKDILADSHLASSDILDRSYFTS    250

BSNT_03186       144 VYFREKGGILFEIATDEPGFMTDETFSELGTSLKLPEWLEKHRHQITDIL    193
                     :||||.||||||:|||||||||||:|..|||.||||||||:||.|||.:|
RBAM_019330__    251 IYFRESGGILFEMATDEPGFMTDESFENLGTELKLPEWLEEHRSQITAVL    300

BSNT_03186       194 PEL----    196
                     |::    
RBAM_019330__    301 PKMEKGE    307


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