Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03185 and RBAM_019320
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:04
# Commandline: needle
# -asequence pep-align/BSNT_03185___yodD.1.9828.seq
# -bsequence pep-align/RBAM_019320___yodD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03185___yodD-RBAM_019320___yodD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03185___yodD-RBAM_019320___yodD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03185___yodD
# 2: RBAM_019320___yodD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 201
# Identity: 161/201 (80.1%)
# Similarity: 178/201 (88.6%)
# Gaps: 1/201 ( 0.5%)
# Score: 865.0
#
#
#=======================================
BSNT_03185___ 1 -MKHIYEKGTSDNVLLLLHGTGGNEHDLLSLGRFIDPNAHLLGVRGSVLE 49
|||::|:|||:|||||||||||||||||||||||||||.||||||||.|
RBAM_019320__ 1 MMKHVFEQGTSENVLLLLHGTGGNEHDLLSLGRFIDPNASLLGVRGSVSE 50
BSNT_03185___ 50 NGMPRFFKRLSEGVFDEKDLVVRTRELKDFIDEAAETHQFDRGKVIAVGY 99
||||||||||.|||||||||:.||.|||:||||||:.:.|.|..|||.||
RBAM_019320__ 51 NGMPRFFKRLKEGVFDEKDLIERTEELKNFIDEAAQMYGFSRENVIAAGY 100
BSNT_03185___ 100 SNGANIAASLLFHYKDVLKGAILHHPMVPIRGIELPDMAGLPVFIGAGKY 149
|||||||||||||||||||||:||||||||||::||||.|:||||||||.
RBAM_019320__ 101 SNGANIAASLLFHYKDVLKGAVLHHPMVPIRGVKLPDMEGMPVFIGAGKR 150
BSNT_03185___ 150 DPLCTKEESEELYRYLRDSGASASVFWQDGGHQLTQHEAEQAREWYKEAI 199
|||||||||||||:||.|:.||.|:.||:|||||||.||||||.||.|..
RBAM_019320__ 151 DPLCTKEESEELYQYLTDAHASVSLVWQEGGHQLTQQEAEQARTWYSERF 200
BSNT_03185___ 200 V 200
:
RBAM_019320__ 201 L 201
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