Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03182 and RBAM_019310
See
DNA alignment /
Visit
BSNT_03182 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:04
# Commandline: needle
# -asequence pep-align/BSNT_03182___yodC.1.9828.seq
# -bsequence pep-align/RBAM_019310___yodC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03182___yodC-RBAM_019310___yodC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03182___yodC-RBAM_019310___yodC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03182___yodC
# 2: RBAM_019310___yodC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 203
# Identity: 168/203 (82.8%)
# Similarity: 189/203 (93.1%)
# Gaps: 1/203 ( 0.5%)
# Score: 880.0
#
#
#=======================================
BSNT_03182___ 1 -MTNTLDVLKARASVKEYDTNAPISKEELTELLDFAAKAPSAWNLQHWHF 49
||:.|||||.||||||||.:|.|:||||||||:...:||||||||||||
RBAM_019310__ 1 MMTSVLDVLKERASVKEYDKDAVITKEELTELLEITTQAPSAWNLQHWHF 50
BSNT_03182___ 50 TVFHSDESKAELLPVAYNQKQIVESSAVVAILGDLKANENGEEVYAELAS 99
.||||||:||.|||||:|||||::||||:|:|||||||||||:||||||.
RBAM_019310__ 51 QVFHSDEAKAALLPVAFNQKQIIDSSAVIAVLGDLKANENGEDVYAELAE 100
BSNT_03182___ 100 QGYITDEIKQTLLGQINGAYQSEQFARDSAFLNASLAAMQLMIAAKAKGY 149
||.||:|||||||||||||||::||||||||.||||||||||:|||||||
RBAM_019310__ 101 QGNITEEIKQTLLGQINGAYQNDQFARDSAFSNASLAAMQLMLAAKAKGY 150
BSNT_03182___ 150 DTCAIGGFNKEQFQKQFDISERYVPVMLISIGKAVKPAHQSNRLPLSKVS 199
|||||||||||||.|:||:|||:||||||||||||||||:|||||:||||
RBAM_019310__ 151 DTCAIGGFNKEQFVKEFDVSERFVPVMLISIGKAVKPAHKSNRLPVSKVS 200
BSNT_03182___ 200 TWL 202
|||
RBAM_019310__ 201 TWL 203
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.