Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03181 and RBAM_019300

See DNA alignment / Visit BSNT_03181 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:04
# Commandline: needle
#    -asequence pep-align/BSNT_03181___yodB.1.9828.seq
#    -bsequence pep-align/RBAM_019300___yodB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03181___yodB-RBAM_019300___yodB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03181___yodB-RBAM_019300___yodB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03181___yodB
# 2: RBAM_019300___yodB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 116
# Identity:      99/116 (85.3%)
# Similarity:   103/116 (88.8%)
# Gaps:           7/116 ( 6.0%)
# Score: 500.5
# 
#
#=======================================

BSNT_03181___      1 MGNTMCPKMESAFSLLGKRWNGLIIHVLMDGPKRFKEITETIPMISQKML     50
                     ||.|||||||||||||||||||||||||||||||||::|||||.||||||
RBAM_019300__      1 MGYTMCPKMESAFSLLGKRWNGLIIHVLMDGPKRFKDMTETIPTISQKML     50

BSNT_03181___     51 AERLKELEQNEIVERQVLPETPVKVIYTLTEKGTALQAVFQEMQAWADQF    100
                     |||||||||||||||||||||||||||.||:||.||||||||||.|||.|
RBAM_019300__     51 AERLKELEQNEIVERQVLPETPVKVIYKLTDKGLALQAVFQEMQKWADSF    100

BSNT_03181___    101 CEPG----DTVCEEEK    112
                     ||||    || |:|  
RBAM_019300__    101 CEPGGSANDT-CDE--    113


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