Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03181 and RBAM_019300
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:04
# Commandline: needle
# -asequence dna-align/BSNT_03181___yodB.1.9828.seq
# -bsequence dna-align/RBAM_019300___yodB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03181___yodB-RBAM_019300___yodB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03181___yodB-RBAM_019300___yodB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03181___yodB
# 2: RBAM_019300___yodB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 354
# Identity: 268/354 (75.7%)
# Similarity: 268/354 (75.7%)
# Gaps: 27/354 ( 7.6%)
# Score: 1024.0
#
#
#=======================================
BSNT_03181___ 1 GTGGGAAATACGATGTGCCCTAAAATGGAATCCGC--ATTCTCATTGCTG 48
||||||.||||.|||||.||||||||||||||||| .|||||.|| ||
RBAM_019300__ 1 GTGGGATATACAATGTGTCCTAAAATGGAATCCGCTTTTTCTCTTT--TG 48
BSNT_03181___ 49 GGAAAACGATGGAACGGTCTGATCATCCATGTGCTAATGGATGGGCCGAA 98
|||||.||.||||||||.||.||.||||||||.||.|||||.||||||||
RBAM_019300__ 49 GGAAAGCGCTGGAACGGCCTCATTATCCATGTACTGATGGACGGGCCGAA 98
BSNT_03181___ 99 ACGGTTTAAAGAGATAACGGAAACAATACCGATGATCAGCCAAAAAATGT 148
|||.||||||||.||.||.|||||.|||||||..|||||||||||||||.
RBAM_019300__ 99 ACGATTTAAAGATATGACCGAAACGATACCGACAATCAGCCAAAAAATGC 148
BSNT_03181___ 149 TGGCAGAGCGCTTGAAGGAGCTTGAACAAAACGAGATTGTCGAACGGCAG 198
|.||.|||||..|.||.|||||.||||||||.||.||||||||.||.|||
RBAM_019300__ 149 TCGCGGAGCGGCTCAAAGAGCTGGAACAAAATGAAATTGTCGAGCGTCAG 198
BSNT_03181___ 199 GTTCTCCCTGAAACGCCGGTCAAAGTCATCTACACGCTGACTGAAAAAGG 248
||.||.||||||||.||.|||||||||||.||.|..||||||||.|||||
RBAM_019300__ 199 GTGCTGCCTGAAACACCTGTCAAAGTCATTTATAAACTGACTGATAAAGG 248
BSNT_03181___ 249 AACAGCGCTTCAAGCTGTATTTCAAGAGATGCAGGCATGGGCCGATCA-A 297
....||.||.|||||.||.|||||.||.|||||...||||||.|| || .
RBAM_019300__ 249 CTTGGCCCTGCAAGCCGTTTTTCAGGAAATGCAAAAATGGGCAGA-CAGT 297
BSNT_03181___ 298 TTTTGCGAGCCTGG------------TGACACAGTGTGTGAAGAAGAGAA 335
|||||||||||.|| .|||||| |||||.| |
RBAM_019300__ 298 TTTTGCGAGCCCGGGGGATCTGCCAACGACACA---TGTGATG------A 338
BSNT_03181___ 336 ATAA 339
||||
RBAM_019300__ 339 ATAA 342
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