Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01722 and RBAM_019290

See DNA alignment / Visit BSNT_01722 in genome browser / Return to Orthologue table

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:24
# Commandline: needle
#    -asequence pep-align/BSNT_01722___yhgB.1.9828.seq
#    -bsequence pep-align/RBAM_019290___yoaQ.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01722___yhgB-RBAM_019290___yoaQ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01722___yhgB-RBAM_019290___yoaQ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01722___yhgB
# 2: RBAM_019290___yoaQ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 124
# Identity:      37/124 (29.8%)
# Similarity:    62/124 (50.0%)
# Gaps:          21/124 (16.9%)
# Score: 172.0
# 
#
#=======================================

BSNT_01722___      1 ----MKHTCPVCGFKGL-AEPPYDHEGNHSHEICPCCGFQFGF-DDYEMQ     44
                         ..:.|.:|||||| ..|.|:.|...:.:|||||||:||: :|:::.
RBAM_019290__      1 MLVSELYPCLICGFKGLETSPVYNGEYQKTFDICPCCGFEFGYSEDHDVS     50

BSNT_01722___     45 ----HEDDSYLEPSESIIAYRKNWLAEGCVIFSPECFPKHLQKANRVLRH     90
                         ...|..:|.:..:  |||.|:..|..:|||...|...:..:.:...
RBAM_019290__     51 LGFIVTPDHLIEAAFQL--YRKQWIEGGMKLFSPNDVPAECKNDHFLTFD     98

BSNT_01722___     91 HLIEQLKQINVHLPS---------    105
                     .|::|||.:|::|.:         
RBAM_019290__     99 ALLKQLKGLNLNLNNFDINGFYDE    122


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