Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03179 and RBAM_019280

See DNA alignment / Visit BSNT_03179 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:03
# Commandline: needle
#    -asequence pep-align/BSNT_03179___yodA.1.9828.seq
#    -bsequence pep-align/RBAM_019280___yodA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03179___yodA-RBAM_019280___yodA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03179___yodA-RBAM_019280___yodA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03179___yodA
# 2: RBAM_019280___yodA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 129
# Identity:      96/129 (74.4%)
# Similarity:   114/129 (88.4%)
# Gaps:           0/129 ( 0.0%)
# Score: 503.0
# 
#
#=======================================

BSNT_03179___      1 MPLLRFDVIEGHDEKSLQLLLDTAHQAMVEAFGVPERDRYQIVHQHPANE     50
                     |||||||||||.|:.:|:.||||||.|||:||.||..|||||||||..:|
RBAM_019280__      1 MPLLRFDVIEGRDDAALKKLLDTAHYAMVKAFDVPVTDRYQIVHQHRPHE     50

BSNT_03179___     51 LIIQDTGLGFQRTKDMVIISMTSKARTESQKEKLYALLAERLEEKCGISP    100
                     |||:||||||:|:||:||||:.||||||.|||.||.|:|::|:.:|||||
RBAM_019280__     51 LIIEDTGLGFKRSKDLVIISIVSKARTEHQKETLYQLMADQLKTECGISP    100

BSNT_03179___    101 EDLMVSITENGDADWSFGLGEAQFLNGKL    129
                     ||:|:||||||:|||||||||||||.|||
RBAM_019280__    101 EDVMISITENGNADWSFGLGEAQFLTGKL    129


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