Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03173 and RBAM_019260

See DNA alignment / Visit BSNT_03173 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:03
# Commandline: needle
#    -asequence pep-align/BSNT_03173___yozR.1.9828.seq
#    -bsequence pep-align/RBAM_019260___yozR.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03173___yozR-RBAM_019260___yozR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03173___yozR-RBAM_019260___yozR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03173___yozR
# 2: RBAM_019260___yozR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 157
# Identity:     103/157 (65.6%)
# Similarity:   127/157 (80.9%)
# Gaps:           3/157 ( 1.9%)
# Score: 558.5
# 
#
#=======================================

BSNT_03173___      1 MFEWNKYFPFHNQFSKEALKKADPKEVETYVNRVMESVFGSDYAAQFPFR     50
                     ||:|||||||.||||||..|.||||:||||||||||||||:.||.|||||
RBAM_019260__      1 MFDWNKYFPFQNQFSKETFKNADPKDVETYVNRVMESVFGAGYAGQFPFR     50

BSNT_03173___     51 DPLPQKEHPAKPDAKPDVKPDIDIFETADHVFVKVPISEEWLEQVRIKHT    100
                     ||:.:...|.  :|:|. ||:||:|||:||||.|:|..:|.|:::|||||
RBAM_019260__     51 DPMSKNAEPV--EAEPP-KPEIDLFETSDHVFAKIPAEQEELDRIRIKHT     97

BSNT_03173___    101 SHELWLENLPRADHPKKVNLPCLVKRKGTKAVYKDGLLEVMFQKQQDYNM    150
                     ||.|.:||....:..|::.||.||||||||||||||::||||.||:|||:
RBAM_019260__     98 SHSLVVENSSLGEGKKEIVLPSLVKRKGTKAVYKDGMIEVMFSKQEDYNL    147

BSNT_03173___    151 SEVEIIR    157
                     |||||:|
RBAM_019260__    148 SEVEILR    154


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