Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03168 and RBAM_019230

See DNA alignment / Visit BSNT_03168 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:03
# Commandline: needle
#    -asequence pep-align/BSNT_03168___yojF.1.9828.seq
#    -bsequence pep-align/RBAM_019230___yojF.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03168___yojF-RBAM_019230___yojF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03168___yojF-RBAM_019230___yojF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03168___yojF
# 2: RBAM_019230___yojF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 116
# Identity:     113/116 (97.4%)
# Similarity:   115/116 (99.1%)
# Gaps:           0/116 ( 0.0%)
# Score: 587.0
# 
#
#=======================================

BSNT_03168___      1 MKAIIKEDVQASLERYADRPVYIHLETTTGSYSAHLNEKNMTVVAYIRNA     50
                     ||||||||||.|||||||||||||||||||||||||||||||||||||||
RBAM_019230__      1 MKAIIKEDVQTSLERYADRPVYIHLETTTGSYSAHLNEKNMTVVAYIRNA     50

BSNT_03168___     51 KVTYHQAKIKGNGPYRVGLKTEEGWIYAEGLTEYTVDEENRLLMAGHLPG    100
                     |||||||||||||||||||||||||||||||||||||:|:||||||||||
RBAM_019230__     51 KVTYHQAKIKGNGPYRVGLKTEEGWIYAEGLTEYTVDDEDRLLMAGHLPG    100

BSNT_03168___    101 GKLAISLQISEKPFTV    116
                     ||||||||||||||||
RBAM_019230__    101 GKLAISLQISEKPFTV    116


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