Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03168 and RBAM_019230
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:03
# Commandline: needle
# -asequence dna-align/BSNT_03168___yojF.1.9828.seq
# -bsequence dna-align/RBAM_019230___yojF.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03168___yojF-RBAM_019230___yojF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03168___yojF-RBAM_019230___yojF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03168___yojF
# 2: RBAM_019230___yojF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 351
# Identity: 302/351 (86.0%)
# Similarity: 302/351 (86.0%)
# Gaps: 0/351 ( 0.0%)
# Score: 1314.0
#
#
#=======================================
BSNT_03168___ 1 ATGAAAGCGATCATAAAAGAAGATGTGCAAGCATCTTTAGAACGATATGC 50
||||||||||||||||||||||||||||||.|.||||||||.||||||||
RBAM_019230__ 1 ATGAAAGCGATCATAAAAGAAGATGTGCAAACTTCTTTAGAGCGATATGC 50
BSNT_03168___ 51 GGACCGCCCTGTATATATCCATTTAGAAACCACCACAGGTTCTTATTCAG 100
.||.||.|||||||||||||||||.|||||.||.||.|||||||||||||
RBAM_019230__ 51 CGATCGTCCTGTATATATCCATTTGGAAACAACGACCGGTTCTTATTCAG 100
BSNT_03168___ 101 CGCACTTAAATGAAAAGAACATGACGGTTGTTGCGTATATTCGCAATGCA 150
||||..|.|||||.||.||||||||||||||.||.|||||.|||||||||
RBAM_019230__ 101 CGCATCTGAATGAGAAAAACATGACGGTTGTAGCCTATATACGCAATGCA 150
BSNT_03168___ 151 AAAGTTACTTATCATCAGGCAAAAATCAAAGGCAACGGGCCTTACCGCGT 200
|||||.||.||.||||||||.|||||||||||.|||||.||.||||||||
RBAM_019230__ 151 AAAGTGACGTACCATCAGGCGAAAATCAAAGGAAACGGCCCGTACCGCGT 200
BSNT_03168___ 201 TGGCTTGAAAACAGAAGAAGGCTGGATTTATGCTGAAGGCTTGACTGAAT 250
.||.||||||||.|||||||||||||||||.||.|||||..|||||||.|
RBAM_019230__ 201 CGGTTTGAAAACGGAAGAAGGCTGGATTTACGCAGAAGGTCTGACTGAGT 250
BSNT_03168___ 251 ACACGGTAGATGAAGAAAACCGTTTATTAATGGCGGGACATCTGCCGGGC 300
|.||.||||||||.|||.||||.||.||||||||.||.||||||||||||
RBAM_019230__ 251 ATACAGTAGATGACGAAGACCGCTTGTTAATGGCAGGGCATCTGCCGGGC 300
BSNT_03168___ 301 GGTAAACTGGCTATTTCTCTGCAAATCAGCGAAAAACCATTCACAGTTTA 350
||.|||.||||.|||||.||.||||||||||||||.||.||.||||||||
RBAM_019230__ 301 GGAAAATTGGCGATTTCGCTTCAAATCAGCGAAAAGCCGTTTACAGTTTA 350
BSNT_03168___ 351 A 351
|
RBAM_019230__ 351 A 351
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