Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03161 and RBAM_019180
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:02
# Commandline: needle
# -asequence pep-align/BSNT_03161___yojK.1.9828.seq
# -bsequence pep-align/RBAM_019180___yojK.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03161___yojK-RBAM_019180___yojK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03161___yojK-RBAM_019180___yojK.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03161___yojK
# 2: RBAM_019180___yojK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 408
# Identity: 249/408 (61.0%)
# Similarity: 312/408 (76.5%)
# Gaps: 8/408 ( 2.0%)
# Score: 1325.0
#
#
#=======================================
BSNT_03161___ 1 MANVLMIGFPGEGHINPSIGVMKELKSRGENITYYAVKEYKEKITALDIE 50
||||||||||||||||||:||:||||::||::.||.||||:.||.:...|
RBAM_019180__ 1 MANVLMIGFPGEGHINPSLGVVKELKAKGEHVVYYGVKEYENKIASSGAE 50
BSNT_03161___ 51 FREYHDFRGDYFGKNATGDEERDFTEMICAFLKSCKDIATHIYEEVKHES 100
||||.|||.|.|||||||||:||.||.:...:::.|..|..|.||||.||
RBAM_019180__ 51 FREYEDFRKDEFGKNATGDEQRDATEFLLLMIETSKKAALRILEEVKDES 100
BSNT_03161___ 101 YDYVIYDHHLLAGKVIANLLKLPRFSLCTTFAMNEEFAKEMMGAYMKGSL 150
|||::||||.|||:::.|.||||.:||||||||||.|.||: :...:|
RBAM_019180__ 101 YDYILYDHHFLAGRLVRNQLKLPAYSLCTTFAMNEAFIKEV---FSNTNL 147
BSNT_03161___ 151 --EDSPHYESYQQLAETLNADFQAEIKKPFDVFLADGDLTIVFTSRGFQP 198
|:|.||.:|.:....||.:|.|:||.|:|:|..||..|||||||.|||
RBAM_019180__ 148 VSEESSHYPAYTEAVSRLNEEFSADIKTPYDIFSNDGRKTIVFTSRAFQP 197
BSNT_03161___ 199 LAEQFGERYVFVGPSITERAGNNDFPFDQIDNENVLFISMGTIFNNQKQF 248
..|:||:.|:||||||||||...||||:|::.|.||||||||||||||:.
RBAM_019180__ 198 KEEEFGDSYLFVGPSITERAAAQDFPFEQLEGEKVLFISMGTIFNNQKEL 247
BSNT_03161___ 249 FNQCLEVCKDFDGKVVLSIGKHIKTSELNDIPENFIVRPYVPQLEILKRA 298
||:||:..::|:||.|:|||||:..:||::||||.||:||||||||||||
RBAM_019180__ 248 FNKCLKAVRNFNGKAVMSIGKHLDPAELDEIPENVIVKPYVPQLEILKRA 297
BSNT_03161___ 299 SLFVTHGGMNSTSEGLYFETPLVVIPMGGDQFVVADQVEKVGAGKVLKKE 348
.||:|||||||||||||::||::|||||.|||.|..|||..||||:.|||
RBAM_019180__ 298 DLFITHGGMNSTSEGLYYKTPMIVIPMGADQFAVGSQVENTGAGKMFKKE 347
BSNT_03161___ 349 ELSESLLKETIQEVMNNRSYAEKAKEIGQSLKAAGGSKKAADSILEAVKQ 398
:::..||.|.|:|:..|..|..||.|||:|||||||:::||:.|.|.|
RBAM_019180__ 348 DVTAELLTEAIKELSENPEYQTKASEIGESLKAAGGAQRAAELIAEDV-- 395
BSNT_03161___ 399 KTQSANA- 405
||.....
RBAM_019180__ 396 KTAETRVL 403
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