Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03159 and RBAM_019170
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:02
# Commandline: needle
# -asequence pep-align/BSNT_03159___yojL.1.9828.seq
# -bsequence pep-align/RBAM_019170___yojL.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03159___yojL-RBAM_019170___yojL.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03159___yojL-RBAM_019170___yojL.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03159___yojL
# 2: RBAM_019170___yojL
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 421
# Identity: 287/421 (68.2%)
# Similarity: 330/421 (78.4%)
# Gaps: 15/421 ( 3.6%)
# Score: 1441.5
#
#
#=======================================
BSNT_03159___ 1 MKKKIVAGLAVSAVVGSSMAAAPAEAKTIKVKSGDSLWKLSRQYDTTISA 50
|||||.||||||||:.|:.|..|||||||:||||||||||||||.|:|||
RBAM_019170__ 1 MKKKIAAGLAVSAVMTSTFAVHPAEAKTIQVKSGDSLWKLSRQYHTSISA 50
BSNT_03159___ 51 LKSENKLKSTVLYVGQSLKVPESSKKSTTSPSNSSKTSTYTVAYGDSLWM 100
|::|||||||:|:.||.|.:|:.|....|.......|..|||.||||||:
RBAM_019170__ 51 LQAENKLKSTILHPGQRLHIPDGSGTHKTGQKGKRSTGAYTVTYGDSLWV 100
BSNT_03159___ 101 IAKNHKMSVSELKSLNSLSSDLIRPGQKLKIKGTSSSSGSNGSKKNSGSN 150
|||.:|||||||:|||.||||:|.|||||||||::..:...|.:......
RBAM_019170__ 101 IAKKYKMSVSELRSLNRLSSDVIYPGQKLKIKGSAGGTDGGGRQTKPDKG 150
BSNT_03159___ 151 SSGSSKSTYTVKLGDSLWKIANSLNMTVAELKTLNGLTSDTLYPKQVLKI 200
:.| |||||.|||||||||...:|:||||.||.||||.|||.|||||
RBAM_019170__ 151 ALG----TYTVKPGDSLWKIANQTGITIAELKKLNQLTSDMLYPNQVLKI 196
BSNT_03159___ 201 KGSSSPKNGNSGSKKPSNSNPS-KRTTYKVKAGDSLWKIANRLGVTVQSI 249
|||| .:||||:..||:|||| |.:||||||||||||||||.|:|.|.|
RBAM_019170__ 197 KGSS--HSGNSGTTPPSHSNPSEKPSTYKVKAGDSLWKIANRFGITAQLI 244
BSNT_03159___ 250 RDKNNLSSDVLQIGQVLTISGASKS-----NPSN-PTKPTKPKDNSGSNI 293
|:||.|::|||||||||.|:|..|: .|.| |.||.|| |:....
RBAM_019170__ 245 REKNKLTTDVLQIGQVLVINGTGKTEDPVRQPDNKPVKPNKP--NTPEPP 292
BSNT_03159___ 294 QIGSKIDRMITEAKKYVGVPYRWGGNTPAGFDCSGFIYYLINNVSSISRL 343
..||||||||.||||:|||||||||||||||||||:||||:|.|||:|||
RBAM_019170__ 293 VTGSKIDRMIGEAKKHVGVPYRWGGNTPAGFDCSGYIYYLLNKVSSVSRL 342
BSNT_03159___ 344 STAGYWNVMQKVSQPSVGDFVFFTTYKSGPSHMGIYLGGGDFIHASSSGV 393
|||||||.|:.:||||.||||||||||:||||||:|||||||||||||||
RBAM_019170__ 343 STAGYWNTMKHISQPSAGDFVFFTTYKAGPSHMGMYLGGGDFIHASSSGV 392
BSNT_03159___ 394 DISNLSNSYWKQRYLGARSYF 414
::|||||.|||:.||||||||
RBAM_019170__ 393 EVSNLSNPYWKKAYLGARSYF 413
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