Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03157 and RBAM_019160

See DNA alignment / Visit BSNT_03157 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:02
# Commandline: needle
#    -asequence pep-align/BSNT_03157___yojM.1.9828.seq
#    -bsequence pep-align/RBAM_019160___yojM.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03157___yojM-RBAM_019160___yojM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03157___yojM-RBAM_019160___yojM.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03157___yojM
# 2: RBAM_019160___yojM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 196
# Identity:     133/196 (67.9%)
# Similarity:   158/196 (80.6%)
# Gaps:           0/196 ( 0.0%)
# Score: 740.0
# 
#
#=======================================

BSNT_03157___      1 MHRLLLLMMLTALGVAGCGQKKPPDPPNRVPEKKVVETSAFGHHVQLVNR     50
                     |:||||.:||.::.:.|||.:..|.||.:..|.:.:|.||:..|..|:|:
RBAM_019160__      1 MNRLLLFLMLVSITLCGCGGRPAPVPPKKHGESRALEASAYREHAGLINQ     50

BSNT_03157___     51 EGKAVGFIEIKESDDEGLDIHISANSLRPGASLGFHIYEKGSCVRPDFES    100
                     .||.:|:||::||||||.||||||..|.||.||||||||||:|..|||||
RBAM_019160__     51 NGKTIGYIEVRESDDEGSDIHISAGHLPPGTSLGFHIYEKGTCQAPDFES    100

BSNT_03157___    101 AGGPFNPLNKEHGFNNPMGHHAGDLPNLEVGADGKVDVIMNAPDTSLKKG    150
                     |||||||||||||||||||||||||||||||||||||||||||.||||:|
RBAM_019160__    101 AGGPFNPLNKEHGFNNPMGHHAGDLPNLEVGADGKVDVIMNAPQTSLKEG    150

BSNT_03157___    151 SKLNILDEDGSAFIIHEQADDYLTNPSGNSGARIVCGALLGNNEKQ    196
                     |:|::||.|||||:|||..|||||||||||||||.|..|..:..::
RBAM_019160__    151 SRLSLLDRDGSAFVIHEHTDDYLTNPSGNSGARIACAPLTKSARRE    196


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