Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_03156 and RBAM_019150

See DNA alignment / Visit BSNT_03156 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:02
# Commandline: needle
#    -asequence pep-align/BSNT_03156___yojN.1.9828.seq
#    -bsequence pep-align/RBAM_019150___yojN.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03156___yojN-RBAM_019150___yojN.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03156___yojN-RBAM_019150___yojN.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03156___yojN
# 2: RBAM_019150___yojN
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 296
# Identity:     260/296 (87.8%)
# Similarity:   279/296 (94.3%)
# Gaps:           0/296 ( 0.0%)
# Score: 1337.0
# 
#
#=======================================

BSNT_03156___      1 MTTQLQHLTLPEDIQQKLLSYKEQPISPEFQSLIGTSGYEAEDEAILFDA     50
                     ||::||||:||||||.||.:|:..|:|.||:.|||:|||||||:||:|||
RBAM_019150__      1 MTSELQHLSLPEDIQNKLQAYQNHPVSQEFRDLIGSSGYEAEDKAIVFDA     50

BSNT_03156___     51 IIALAMGKNVLLKGPTGSGKTKLAETLSSYFNKPMHSVNCSVDLDAEALV    100
                     :|||.||||:||||||||||||||||||:||:||||||||||||||||||
RBAM_019150__     51 VIALTMGKNILLKGPTGSGKTKLAETLSNYFHKPMHSVNCSVDLDAEALV    100

BSNT_03156___    101 GYKTIENQSGQATIEFVSGPVTKAMKEGHFLYIDEINMAKPETLPILNGV    150
                     |||||||:.||||||||.||||.||.||||||||||||||||||||||||
RBAM_019150__    101 GYKTIENEQGQATIEFVPGPVTTAMNEGHFLYIDEINMAKPETLPILNGV    150

BSNT_03156___    151 LDYRKMMTNPFTGEVIRAKSGFGVIAAINEGYVGTVPLNEALKNRFVIID    200
                     ||||||||||||||||:|..||||||||||||||||||||||||||||||
RBAM_019150__    151 LDYRKMMTNPFTGEVIKASEGFGVIAAINEGYVGTVPLNEALKNRFVIID    200

BSNT_03156___    201 VPYIKGELLKQVLMSQSALKDEKLIDRFITLSSDLIVQAHNGQVSEEAAS    250
                     ||||||.||||||.|||.|||||||:||:|||||||.|||||||||||||
RBAM_019150__    201 VPYIKGSLLKQVLTSQSVLKDEKLIERFMTLSSDLIAQAHNGQVSEEAAS    250

BSNT_03156___    251 IRALIDTCDLAAYIPPRRAIERGIVEKLDDDREKAAVRNIAETLFE    296
                     ||||||||||||||||:|||||||||||||||||||||||||||||
RBAM_019150__    251 IRALIDTCDLAAYIPPKRAIERGIVEKLDDDREKAAVRNIAETLFE    296


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.