Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03156 and RBAM_019150
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:02
# Commandline: needle
# -asequence dna-align/BSNT_03156___yojN.1.9828.seq
# -bsequence dna-align/RBAM_019150___yojN.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03156___yojN-RBAM_019150___yojN.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03156___yojN-RBAM_019150___yojN.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03156___yojN
# 2: RBAM_019150___yojN
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 908
# Identity: 699/908 (77.0%)
# Similarity: 699/908 (77.0%)
# Gaps: 34/908 ( 3.7%)
# Score: 2692.5
#
#
#=======================================
BSNT_03156___ 1 ATGACAACTCAACTACAGCACTTAACATTGCCGGAAGATATACAACAAAA 50
|||||..|..||.||||||||.||.||.|.|||||||||||||||.|.||
RBAM_019150__ 1 ATGACTTCAGAATTACAGCACCTATCACTTCCGGAAGATATACAAAACAA 50
BSNT_03156___ 51 GCT-----TTTATCATATAAAGAGCAGCCTATTTCC--------CCGGAG 87
.|| .||||| ||.|.||.||..||||| |||| |
RBAM_019150__ 51 ACTGCAGGCTTATC-----AAAATCATCCCGTTTCCCAAGAATTCCGG-G 94
BSNT_03156___ 88 TTTCAATCGCTTATAGGAACATCAGGCTATGAGGCGGAGGATGAAGCCAT 137
.||.|||| |||.||||||||||||||||.||.|||.||||.||
RBAM_019150__ 95 ATTTAATC-------GGATCATCAGGCTATGAGGCCGAAGATAAAGCGAT 137
BSNT_03156___ 138 TTTATTTGACGCCATTATTGCATTAGCCATGGGGAAAAATGTCCTGCTGA 187
|.||||.||.|||.|.|||||.||..|.|||||.||||||.||.|..|.|
RBAM_019150__ 138 TGTATTCGATGCCGTCATTGCTTTGACTATGGGAAAAAATATCTTATTAA 187
BSNT_03156___ 188 AAGGGCCTACAGGTTCAGGAAAAACAAAGTTGGCAGAAACATTGTCCAGC 237
||||.||.||.||||||||.||||||||.|||||.|||||..|.||.|.|
RBAM_019150__ 188 AAGGACCGACGGGTTCAGGGAAAACAAAATTGGCGGAAACGCTTTCGAAC 237
BSNT_03156___ 238 TATTTTAATAAACCGATGCACAGCGTCAACTGTTCAGTCGACTTGGACGC 287
||||||.|||||||||||||||||||||||||.||.||.|||.|.||.||
RBAM_019150__ 238 TATTTTCATAAACCGATGCACAGCGTCAACTGCTCCGTAGACCTCGATGC 287
BSNT_03156___ 288 TGAGGCATTGGTCGGTTATAAAACGATTGAAAATCAATCTGGCCAGGCGA 337
.||.||..|.|||||.||||||||||||||||||.||...||.|||||||
RBAM_019150__ 288 AGAAGCGCTTGTCGGCTATAAAACGATTGAAAATGAACAGGGACAGGCGA 337
BSNT_03156___ 338 CAATCGAGTTTGTTTCAGGACCTGTTACAAAGGCAATGAAGGAAGGCCAT 387
||||.||.||.|||.|.||||||||.||||..||||||||.||.||.|||
RBAM_019150__ 338 CAATTGAATTCGTTCCCGGACCTGTAACAACCGCAATGAACGAGGGACAT 387
BSNT_03156___ 388 TTTCTTTATATAGATGAAATCAATATGGCGAAGCCGGAAACACTGCCTAT 437
|||.|.||.||.||.||||||||||||||.|||||.|||||.||.||.||
RBAM_019150__ 388 TTTTTATACATTGACGAAATCAATATGGCAAAGCCTGAAACCCTTCCGAT 437
BSNT_03156___ 438 TTTAAACGGTGTATTAGATTACAGAAAAATGATGACAAATCCGTTTACAG 487
|.|||||||.||..||||||||||||||||||||||||||||.|||||||
RBAM_019150__ 438 TCTAAACGGCGTGCTAGATTACAGAAAAATGATGACAAATCCCTTTACAG 487
BSNT_03156___ 488 GCGAGGTCATACGGGCTAAAAGC---GGTTTCGGAGTCATTGCAGCCATC 534
|.||.||.||...||| |||| ||.|||||.||.||.||.||.||.
RBAM_019150__ 488 GAGAAGTGATTAAGGC---AAGCGAAGGATTCGGTGTTATCGCCGCGATT 534
BSNT_03156___ 535 AATGAAGGTTATGTCGGAACTGTTCCTCTGAATGAAGCGTTGAAAAACCG 584
||||||||.||.|||||.||.|||||.|||||.|||||..|.||||||||
RBAM_019150__ 535 AATGAAGGATACGTCGGCACCGTTCCGCTGAACGAAGCCCTTAAAAACCG 584
BSNT_03156___ 585 TTTTGTCATCATTGATGTGCCTTATATTAAAGGCGAG-CTGCTGAAACAA 633
||||||||||||||||||.||.||||||||||| .|| ||.|||||.||.
RBAM_019150__ 585 TTTTGTCATCATTGATGTTCCGTATATTAAAGG-AAGCCTCCTGAAGCAG 633
BSNT_03156___ 634 GTGCTCATGTCTCAGTCAGCCCTGAAAGACGAGAAATTGATTGACAGATT 683
|||||.|..||||||||.|.|.|.|||||.||||||||.|||||..|.||
RBAM_019150__ 634 GTGCTGACCTCTCAGTCTGTCTTAAAAGATGAGAAATTAATTGAGCGCTT 683
BSNT_03156___ 684 TATCACGCTTTCCTCTGACTTGATCGTTCAGGCCCATAACGGACAGGTGT 733
|||.|||||.||.|||||.||.||||..||.||.|||||||||||.||||
RBAM_019150__ 684 TATGACGCTGTCTTCTGATTTAATCGCACAAGCGCATAACGGACAAGTGT 733
BSNT_03156___ 734 CTGAAGAAGCGGCGTCCATCAGAGCTTTAATCGATACATGTGATTTAGCT 783
|.||||||||||||||||||||.|||.|.||.|||||.||.||.||.|||
RBAM_019150__ 734 CAGAAGAAGCGGCGTCCATCAGGGCTCTCATTGATACGTGCGACTTGGCT 783
BSNT_03156___ 784 GCTTATATTCCGCCGCGTCGTGCCATTGAGCGAGGAATTGTAGAAAAGCT 833
||.||.||.||||||...||.||.|||||..||||.||.||||||||.||
RBAM_019150__ 784 GCGTACATCCCGCCGAAACGGGCGATTGAAAGAGGCATCGTAGAAAAACT 833
BSNT_03156___ 834 TGATGATGATCGGGAAAAAGCGGCCGTCCGAAATATTGCAGAAACTCTGT 883
|||.|||||..||||||||||.||.|||.||||||||||||||||.||||
RBAM_019150__ 834 TGACGATGACAGGGAAAAAGCCGCTGTCAGAAATATTGCAGAAACGCTGT 883
BSNT_03156___ 884 TTGAATGA 891
|.||||||
RBAM_019150__ 884 TCGAATGA 891
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