Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03151 and RBAM_019100
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:01
# Commandline: needle
# -asequence pep-align/BSNT_03151___yocS.1.9828.seq
# -bsequence pep-align/RBAM_019100___yocS.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03151___yocS-RBAM_019100___yocS.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03151___yocS-RBAM_019100___yocS.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03151___yocS
# 2: RBAM_019100___yocS
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 324
# Identity: 262/324 (80.9%)
# Similarity: 288/324 (88.9%)
# Gaps: 3/324 ( 0.9%)
# Score: 1329.0
#
#
#=======================================
BSNT_03151___ 1 MDIIRKISHFAGQTFGIWVIVFAVLGFSFPSLFTWISSYITIFLGIIMFG 50
|:.::|||.|||||||:|||||..|||:.|.||:|||||:||||||||||
RBAM_019100__ 1 MEWLKKISGFAGQTFGLWVIVFGGLGFACPDLFSWISSYMTIFLGIIMFG 50
BSNT_03151___ 51 MGLTLQADDFKELVRKPWQVIIGVIAQYTIMPLVAFGLAFGLHLPAEIAV 100
|||||||||||||:||||.|:|||.||:|||||.||.|:.||.||||||.
RBAM_019100__ 51 MGLTLQADDFKELIRKPWHVVIGVAAQFTIMPLTAFCLSIGLRLPAEIAA 100
BSNT_03151___ 101 GVILVGCCPGGTASNVMTFLAKGNTALSVAVTTISTLLAPVVTPLLIMLF 150
||||||||||||||||||||||||||||||||||||||||:|||.|||||
RBAM_019100__ 101 GVILVGCCPGGTASNVMTFLAKGNTALSVAVTTISTLLAPIVTPALIMLF 150
BSNT_03151___ 151 AKEWLPVSPGSLFISILQAVLFPIIAGLIVKMFFRKQVAKAVHALPLVSV 200
||||||||.||||:||:||||.||:.|:|||:||:|||.:||||||||||
RBAM_019100__ 151 AKEWLPVSFGSLFVSIMQAVLLPIVLGVIVKLFFKKQVGQAVHALPLVSV 200
BSNT_03151___ 201 IGIVAIVSAVVSGNRENLLQSGLLIFSVVILHNGIGYLLGFLCAKLLKMD 250
||||||||:|||.|||:||||||||.||||||||||||||||.|||.|||
RBAM_019100__ 201 IGIVAIVSSVVSVNREHLLQSGLLIVSVVILHNGIGYLLGFLTAKLFKMD 250
BSNT_03151___ 251 YPSQKAIAIEVGMQNSGLGAALATAHFSPLSAVPSAIFSVWHNLSGSMLA 300
|.|||||||||||||||||||:|||||||||||||||||:|||||||:||
RBAM_019100__ 251 YASQKAIAIEVGMQNSGLGAAIATAHFSPLSAVPSAIFSIWHNLSGSVLA 300
BSNT_03151___ 301 TYWSKKVKKIQAGSESSNLSL--- 321
||||||.:|..|..|.....:
RBAM_019100__ 301 TYWSKKKEKNSAEEEEETAKIPFS 324
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