Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03149 and RBAM_019080

See DNA alignment / Visit BSNT_03149 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:00
# Commandline: needle
#    -asequence pep-align/BSNT_03149___sodF.1.9828.seq
#    -bsequence pep-align/RBAM_019080___sodF.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03149___sodF-RBAM_019080___sodF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03149___sodF-RBAM_019080___sodF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03149___sodF
# 2: RBAM_019080___sodF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 281
# Identity:     226/281 (80.4%)
# Similarity:   249/281 (88.6%)
# Gaps:           3/281 ( 1.1%)
# Score: 1262.0
# 
#
#=======================================

BSNT_03149___      1 MKRESYQTEMFNWCEALKDQIQKRGQLDQFEDQIDKMIEALEDDQTTEED     50
                     |||.:|||||.||||.||:|:.::|:.|:|..|||::...|:||..||.:
RBAM_019080__      1 MKRHAYQTEMLNWCETLKEQVIQQGRFDRFAAQIDRIFHTLQDDGFTEAE     50

BSNT_03149___     51 WYKQAAALYRDITESDDTSERRAYVPIGKHVLPKLPYKYSALEPYISRDI    100
                     ||:||:||||||||.::..||||||||||||||||||.||||||||||:|
RBAM_019080__     51 WYEQASALYRDITEPEEPDERRAYVPIGKHVLPKLPYSYSALEPYISREI    100

BSNT_03149___    101 MVLHHTKHHQSYVDGLNKAESELKKARATKNYDLITHWERELAFHGAGHY    150
                     |.||||||||||||||||||.||||||.||.|||:.||||:|||||||||
RBAM_019080__    101 MKLHHTKHHQSYVDGLNKAELELKKARQTKQYDLVAHWERQLAFHGAGHY    150

BSNT_03149___    151 LHSIFWFSMHPNGKRRPTGALFQMIDLSFGSYSAFKEHFTQAAKKVEGVG    200
                     |||||||||:||||||||||||||||.||||||||||.|:||||||||||
RBAM_019080__    151 LHSIFWFSMNPNGKRRPTGALFQMIDASFGSYSAFKEQFSQAAKKVEGVG    200

BSNT_03149___    201 WAILVWAPRSGRLEILTAEKHQ---QWDVIPLLPLDVWEHAYYLQYKNDR    247
                     |||||||||:||||||.|||||   |||||||||||||||||||||||||
RBAM_019080__    201 WAILVWAPRAGRLEILAAEKHQLYSQWDVIPLLPLDVWEHAYYLQYKNDR    250

BSNT_03149___    248 ASYVDHWWNVVDWREAEKRFEQAKEVVWKLY    278
                     |:|||.|||||||||||||||||..|:|.||
RBAM_019080__    251 AAYVDQWWNVVDWREAEKRFEQAHRVIWPLY    281


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