Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03137 and RBAM_018990

See DNA alignment / Visit BSNT_03137 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:00
# Commandline: needle
#    -asequence pep-align/BSNT_03137.1.9828.seq
#    -bsequence pep-align/RBAM_018990.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03137-RBAM_018990.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03137-RBAM_018990.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03137
# 2: RBAM_018990
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 77
# Identity:      32/77 (41.6%)
# Similarity:    45/77 (58.4%)
# Gaps:           2/77 ( 2.6%)
# Score: 151.0
# 
#
#=======================================

BSNT_03137         1 --MLPTNINISHLKTNSIGTGSSLTFGSAELRNRRSAIKRNNGFGEQNAD     48
                       ..|:.||..::|.|.|..|::...||:.:....:|.|||.|:||||.|
RBAM_018990        1 MMFFPSVINFEYIKMNGISGGATFNTGSSVMVRNTAANKRNEGYGEQNGD     50

BSNT_03137        49 VIVMVIPIESIDDRDGADALSMKINHQ     75
                     ..|:||||.||||.|..|..:.||:.:
RBAM_018990       51 CTVVVIPIMSIDDSDLIDGTANKISLR     77


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