Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03136 and RBAM_018980
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:59
# Commandline: needle
# -asequence pep-align/BSNT_03136___yocL.1.9828.seq
# -bsequence pep-align/RBAM_018980___yocL.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03136___yocL-RBAM_018980___yocL.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03136___yocL-RBAM_018980___yocL.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03136___yocL
# 2: RBAM_018980___yocL
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 177
# Identity: 40/177 (22.6%)
# Similarity: 67/177 (37.9%)
# Gaps: 77/177 (43.5%)
# Score: 199.0
#
#
#=======================================
BSNT_03136___ 1 MKKMFRSLIRHCLKPELDKLRECEERLSVIEKQKQSSKQ--ESEETYIHI 48
|||:.:.:.:...:.|||:|::.|::|..::.:.....| |.|:||:||
RBAM_018980__ 1 MKKIMKEIFKKVCEEELDRLKKVEQQLDELQDKCHFEPQTVEGEKTYVHI 50
BSNT_03136___ 49 ETLNVEKIDYHLEFGELTIDELSGRLNIGATYYIPPEEKDKKCQRKPEAP 98
|.:.|:|::|:::|.:|:|:||||.|||||||:.|.....:.|
RBAM_018980__ 51 EHVKVDKVEYNIDFEKLSIEELSGMLNIGATYHTPAHRLKQAC------- 93
BSNT_03136___ 99 STPAVTIRSKRQ-------------------------------------- 110
|...|..||
RBAM_018980__ 94 ---AEEFRDNRQNDAAKEKRQTKQQTPTLRSGGLKLSYLRTAYVAKAISL 140
BSNT_03136___ 110 --------------------------- 110
RBAM_018980__ 141 AEMAFYFELPLSSVLYQYDKMKESKTK 167
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