Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03121 and RBAM_018930

See DNA alignment / Visit BSNT_03121 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:59
# Commandline: needle
#    -asequence pep-align/BSNT_03121___yocC.1.9828.seq
#    -bsequence pep-align/RBAM_018930___yocC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03121___yocC-RBAM_018930___yocC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03121___yocC-RBAM_018930___yocC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03121___yocC
# 2: RBAM_018930___yocC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 165
# Identity:     128/165 (77.6%)
# Similarity:   154/165 (93.3%)
# Gaps:           0/165 ( 0.0%)
# Score: 722.0
# 
#
#=======================================

BSNT_03121___      1 MFTIKEKNRQELEEELNDLEFQIYRMQENMKDLSKDAKVLGIDQSKHDEW     50
                     |||.:|::::|||:||:.|||||:||:||:.|:||||:|||||||.:|:|
RBAM_018930__      1 MFTAEERDQKELEKELHKLEFQIFRMRENLIDVSKDARVLGIDQSNNDDW     50

BSNT_03121___     51 MIVSSIDDGQTCKIMLTDCKTAYRGKGCFSLVASYKDDAIHIGDIKGPPN    100
                     :||||||||||||||||||::||||:|||||:|||.|:||||||||||||
RBAM_018930__     51 IIVSSIDDGQTCKIMLTDCESAYRGRGCFSLIASYYDNAIHIGDIKGPPN    100

BSNT_03121___    101 HGFGSICMKYLKDIARDHNIPKVTGDIAKRDWNHVDRLIHFYEKHQFKVC    150
                     ||:||||||:||.|||:.||||||||||||||:|||||:||||||.|.|.
RBAM_018930__    101 HGYGSICMKFLKHIAREQNIPKVTGDIAKRDWDHVDRLVHFYEKHHFDVW    150

BSNT_03121___    151 IDHDTQSGSIKWVDL    165
                     ||:|||||.||||||
RBAM_018930__    151 IDNDTQSGGIKWVDL    165


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