Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03121 and RBAM_018930
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:59
# Commandline: needle
# -asequence dna-align/BSNT_03121___yocC.1.9828.seq
# -bsequence dna-align/RBAM_018930___yocC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03121___yocC-RBAM_018930___yocC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03121___yocC-RBAM_018930___yocC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03121___yocC
# 2: RBAM_018930___yocC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 499
# Identity: 394/499 (79.0%)
# Similarity: 394/499 (79.0%)
# Gaps: 2/499 ( 0.4%)
# Score: 1538.0
#
#
#=======================================
BSNT_03121___ 1 TTGTTTACTATTAAAGAAAAAAATCGTCAAGAGCTTGAAGAAGAACTAAA 50
|||||||||....||||||.|.|||...|||||||.|||.||||.||..|
RBAM_018930__ 1 TTGTTTACTGCAGAAGAAAGAGATCAGAAAGAGCTGGAAAAAGAGCTTCA 50
BSNT_03121___ 51 TGATTTAGAATTTCAAATTTATC-GCATGCAGGAGAATATGAAGGATTTG 99
|.|..|.||||||||.|||| || |.||||.|||.|||.|||..|||.|.
RBAM_018930__ 51 TAAACTTGAATTTCAGATTT-TCAGAATGCGGGAAAATCTGATAGATGTA 99
BSNT_03121___ 100 TCTAAAGATGCCAAAGTGCTTGGTATTGATCAATCGAAACATGATGAGTG 149
||.|||||.||...||||||||||||||||||||||||..||||.||.||
RBAM_018930__ 100 TCAAAAGACGCGCGAGTGCTTGGTATTGATCAATCGAACAATGACGATTG 149
BSNT_03121___ 150 GATGATTGTTTCCTCGATTGATGATGGCCAAACATGCAAAATTATGCTAA 199
|||.||||||||||||||||||||||||||||||||.||.||||||||.|
RBAM_018930__ 150 GATCATTGTTTCCTCGATTGATGATGGCCAAACATGTAAGATTATGCTGA 199
BSNT_03121___ 200 CTGATTGTAAAACGGCTTACCGAGGAAAAGGCTGTTTTTCACTTGTAGCG 249
||||||||.|..|.||.|||||.||||.|||||||||||||||..|.||.
RBAM_018930__ 200 CTGATTGTGAGTCAGCCTACCGGGGAAGAGGCTGTTTTTCACTGATCGCC 249
BSNT_03121___ 250 TCTTACAAGGACGATGCCATTCATATAGGGGATATAAAAGGCCCTCCGAA 299
|||||..|.|||.|||||||||||||.|||||.||.||||||||.|||||
RBAM_018930__ 250 TCTTATTATGACAATGCCATTCATATCGGGGACATTAAAGGCCCGCCGAA 299
BSNT_03121___ 300 TCACGGGTTTGGTTCCATTTGCATGAAATATTTAAAAGATATAGCAAGAG 349
.|||||.|..||.||.||.||||||||||.|||||||.||||.||.||||
RBAM_018930__ 300 CCACGGCTACGGCTCGATCTGCATGAAATTTTTAAAACATATCGCCAGAG 349
BSNT_03121___ 350 ACCACAATATACCGAAAGTCACCGGAGACATCGCCAAACGGGATTGGAAT 399
|.||.|||||.||||||||.||.||.||||||||.||.||.||||||.||
RBAM_018930__ 350 AGCAGAATATCCCGAAAGTGACGGGCGACATCGCTAAGCGTGATTGGGAT 399
BSNT_03121___ 400 CATGTAGACCGGCTGATTCACTTTTATGAAAAACATCAATTCAAAGTATG 449
|||||.|||.|.||..||||.|||||||||||.|||||.||..|.||.||
RBAM_018930__ 400 CATGTCGACAGACTCGTTCATTTTTATGAAAAGCATCACTTTGATGTTTG 449
BSNT_03121___ 450 TATCGATCATGATACCCAATCCGGCAGCATTAAGTGGGTTGATTTGTAA 498
.||.||..|||||||.|||||.|||.|||||||.|||||.||..|||||
RBAM_018930__ 450 GATTGACAATGATACGCAATCAGGCGGCATTAAATGGGTCGACCTGTAA 498
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