Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03116 and RBAM_018900
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:58
# Commandline: needle
# -asequence pep-align/BSNT_03116___yocA.1.9828.seq
# -bsequence pep-align/RBAM_018900___yocA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03116___yocA-RBAM_018900___yocA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03116___yocA-RBAM_018900___yocA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03116___yocA
# 2: RBAM_018900___yocA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 225
# Identity: 179/225 (79.6%)
# Similarity: 199/225 (88.4%)
# Gaps: 4/225 ( 1.8%)
# Score: 956.0
#
#
#=======================================
BSNT_03116___ 1 MKKKRKGCFAAAGFMMIFVFVIASFLLVLLFFNRDLVKKLPIDTKTIVLE 50
|:||:||||||||.|||.|||:.||.|:|||.|.:.:|.||.|.|.||||
RBAM_018900__ 1 MEKKKKGCFAAAGLMMICVFVMVSFFLILLFSNNEWLKSLPFDVKPIVLE 50
BSNT_03116___ 51 RLTDYKPLVEEELESQGLSNYTSLILGMMYQESKGKGNDPMQSSESLGLK 100
||||||||||:||:.:||:.||||:|||:||||||:||||||||||||||
RBAM_018900__ 51 RLTDYKPLVEDELDEKGLTKYTSLVLGMIYQESKGRGNDPMQSSESLGLK 100
BSNT_03116___ 101 RNEITDPQLSVKQGIKQFTLMYKTGKEKGVDLDTIIQSYNMGAGYIDFVA 150
||||.:||.|:|||||||||||:|||:|||||||||||||||||||||||
RBAM_018900__ 101 RNEIKNPQTSIKQGIKQFTLMYQTGKKKGVDLDTIIQSYNMGAGYIDFVA 150
BSNT_03116___ 151 EHGGTHTEELAKQYSEQQVKKNPDLYTCGGNAKNFRYPYCYGDYTYAEKV 200
||||:||||||||||||||||||.|||||||..|||||||||||||||||
RBAM_018900__ 151 EHGGSHTEELAKQYSEQQVKKNPKLYTCGGNKDNFRYPYCYGDYTYAEKV 200
BSNT_03116___ 201 KEKTKTVEESLQVATLETMESKAHE 225
|.||||||:||.|.||||:|.
RBAM_018900__ 201 KAKTKTVEQSLNVTTLETLEE---- 221
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