Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03114 and RBAM_018890

See DNA alignment / Visit BSNT_03114 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:58
# Commandline: needle
#    -asequence pep-align/BSNT_03114___yozA.1.9828.seq
#    -bsequence pep-align/RBAM_018890___yozA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03114___yozA-RBAM_018890___yozA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03114___yozA-RBAM_018890___yozA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03114___yozA
# 2: RBAM_018890___yozA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 110
# Identity:      99/110 (90.0%)
# Similarity:   101/110 (91.8%)
# Gaps:           3/110 ( 2.7%)
# Score: 489.0
# 
#
#=======================================

BSNT_03114___      1 MTEFRET---EQSAADLDEETLFLVAQTFKALSDPTRIRILHLLSQGEHA     47
                     ||||.|:   ...|.|||||||||||||||||||||||||||||||||||
RBAM_018890__      1 MTEFHESGNKNDPAVDLDEETLFLVAQTFKALSDPTRIRILHLLSQGEHA     50

BSNT_03114___     48 VNGIAEKLNLLQSTVSHQLRFLKNLRLVKSRREGTSIYYSPEDEHVLDVL     97
                     ||.|||||||||||||||||||||||||||||||||||||||||||||||
RBAM_018890__     51 VNDIAEKLNLLQSTVSHQLRFLKNLRLVKSRREGTSIYYSPEDEHVLDVL    100

BSNT_03114___     98 QQMIHHTQHD    107
                     |||||||:||
RBAM_018890__    101 QQMIHHTRHD    110


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