Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03111 and RBAM_018880
See
DNA alignment /
Visit
BSNT_03111 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:58
# Commandline: needle
# -asequence pep-align/BSNT_03111___yobW.1.9828.seq
# -bsequence pep-align/RBAM_018880___yobW.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03111___yobW-RBAM_018880___yobW.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03111___yobW-RBAM_018880___yobW.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03111___yobW
# 2: RBAM_018880___yobW
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 181
# Identity: 107/181 (59.1%)
# Similarity: 137/181 (75.7%)
# Gaps: 8/181 ( 4.4%)
# Score: 598.0
#
#
#=======================================
BSNT_03111___ 1 MHLTLQSVYPAMIIIFFLYKKIKRSIGYQPLKPRWLFTRIILFSLFAFGL 50
||:||||:.|.::|.||||||:|||:|:||||||||:||:|||||.|..|
RBAM_018880__ 1 MHITLQSICPVLMIAFFLYKKVKRSVGFQPLKPRWLYTRMILFSLLAAAL 50
BSNT_03111___ 51 SIFSAIHPFLYGYLILGILGGWLLVFFAKKNISFEKRRGKIYFRTHIWVE 100
:.||..||.|||:||.|...|||||.|||:|||||:||||:|||||:|:|
RBAM_018880__ 51 AFFSITHPALYGHLIFGTFCGWLLVLFAKRNISFEERRGKMYFRTHLWIE 100
BSNT_03111___ 101 VILLTLFLSRFLYRVTELYLTSPDLNSLGSYSQSIGTDPLTIGVCFLIAV 150
:||||||||||:|||.|:|..:.|.....:|||::|.|||||.:.:.|||
RBAM_018880__ 101 LILLTLFLSRFVYRVIEIYRVTADFTHPEAYSQTVGADPLTISIFYFIAV 150
BSNT_03111___ 151 YYIGFSSFVIKLSRNELEQHEYNKEKDILAR 181
||.|||.:|:|.||::....:|.
RBAM_018880__ 151 YYSGFSFYVLKTSRDQTNNSQYG-------- 173
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.