Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03107 and RBAM_018870

See DNA alignment / Visit BSNT_03107 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:58
# Commandline: needle
#    -asequence pep-align/BSNT_03107___yobT.1.9828.seq
#    -bsequence pep-align/RBAM_018870___yobT.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03107___yobT-RBAM_018870___yobT.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03107___yobT-RBAM_018870___yobT.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03107___yobT
# 2: RBAM_018870___yobT
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 239
# Identity:     163/239 (68.2%)
# Similarity:   191/239 (79.9%)
# Gaps:           6/239 ( 2.5%)
# Score: 870.0
# 
#
#=======================================

BSNT_03107___      1 MRITQYQTVWQLTFFPALFPVNCYLVEEENEVTLIDAALPGSYKGIIQAV     50
                     |||.||.:|||||||||||||||||||||..||||||.||.|:|||.||:
RBAM_018870__      1 MRILQYGSVWQLTFFPALFPVNCYLVEEEEGVTLIDAGLPNSHKGIKQAL     50

BSNT_03107___     51 NQLGKPLQHILLTHAHGDHVGSLDTLAQTFPHAKVMISERDSFLLQGDTS    100
                     .||||||..||||||||||:||||:||..||.|.|.|||||||||:||||
RBAM_018870__     51 RQLGKPLNDILLTHAHGDHIGSLDSLAAEFPDASVCISERDSFLLKGDTS    100

BSNT_03107___    101 LRQDEPQTPIKGGIPKHIQTKPHQLLTGGETIGSLLAIPTPGHTPGSMSF    150
                     |.:.|.|||||||:||::||:|.:||.|||.|||||.||.|||||||::|
RBAM_018870__    101 LFEHEAQTPIKGGVPKNVQTEPDRLLKGGERIGSLLVIPAPGHTPGSLAF    150

BSNT_03107___    151 LDTRNGTLIAGDAFQLRGGIAVSGQIKWTFPFPAFATWNKEEAIKSAQLL    200
                     .|.||..||.|||||:|||:||||::||.||||||||||||||:|:|:.|
RBAM_018870__    151 KDMRNDMLIVGDAFQVRGGLAVSGKLKWKFPFPAFATWNKEEAVKTARTL    200

BSNT_03107___    201 ADKAPSCLAVGHGNFLRSPAERMRQAIQKAKKG------    233
                     ....||.||.||||.|.:|.|.|.:|:::|::.      
RBAM_018870__    201 IAHQPSSLAAGHGNVLCNPVEMMAEAVEEAERSLPGGRS    239


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