Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03107 and RBAM_018870
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:58
# Commandline: needle
# -asequence dna-align/BSNT_03107___yobT.1.9828.seq
# -bsequence dna-align/RBAM_018870___yobT.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03107___yobT-RBAM_018870___yobT.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03107___yobT-RBAM_018870___yobT.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03107___yobT
# 2: RBAM_018870___yobT
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 749
# Identity: 489/749 (65.3%)
# Similarity: 489/749 (65.3%)
# Gaps: 76/749 (10.1%)
# Score: 1493.5
#
#
#=======================================
BSNT_03107___ 1 ATGAGAATTACT--CAGTACCAAACGGTTTGGCAGCTGACTTTTTTTCCA 48
|||||||| || ||.|||..||..||||||||||||||||||||||||
RBAM_018870__ 1 ATGAGAAT--CTTACAATACGGAAGTGTTTGGCAGCTGACTTTTTTTCCA 48
BSNT_03107___ 49 GCATTGTTTCCGGTTAATTGCTATTTAGTAGAGGAAGAAAACGAAGTCAC 98
||..|.||.|||||.|||||.|||||.||.||.||||||.|.|.|||.||
RBAM_018870__ 49 GCGCTTTTCCCGGTGAATTGTTATTTGGTTGAAGAAGAAGAAGGAGTAAC 98
BSNT_03107___ 99 CCTTATTGATGCCGCACTGCCAGGCAGCTATAAAGGGATTATTCAAGCTG 148
|||.|||||.||||.||||||...|||..|||||||.||.|..|||||..
RBAM_018870__ 99 CCTGATTGACGCCGGACTGCCTAACAGTCATAAAGGAATCAAACAAGCAT 148
BSNT_03107___ 149 TGAATCAGCTTGGAAAACCGCTTCAGCATATTTTACTGACTCATGCACAT 198
||...||||||||.||.|||||..|..|.||.|||||.||.||.||.||.
RBAM_018870__ 149 TGCGGCAGCTTGGGAAGCCGCTGAATGACATATTACTCACCCACGCGCAC 198
BSNT_03107___ 199 GGGGACCATGTCGGATCACTGGATACATTGGC-----ACAAACATTTCCG 243
|||||.||..||||.||.||.||..||||.|| | |||||||
RBAM_018870__ 199 GGGGATCACATCGGTTCGCTTGACTCATTAGCTGCGGA-----ATTTCCG 243
BSNT_03107___ 244 CATGCAAAGGTCATG-ATCTCGGAACGGGATTCATTCTTGCTCCAAGGTG 292
.||||....||| || ||.||.||.||||||||.||||||||..||||||
RBAM_018870__ 244 GATGCTTCCGTC-TGTATTTCTGAGCGGGATTCTTTCTTGCTGAAAGGTG 292
BSNT_03107___ 293 ACACATCCTT------GCGGCAAGATGAGCCGCAGACGCCTATAAAAGGA 336
||||.||.|| || ||||..|.||.|||||.|||||.||.
RBAM_018870__ 293 ACACTTCATTATTTGAGC------ATGAAGCACAAACGCCGATAAAGGGG 336
BSNT_03107___ 337 GGTATTCCGAAACACATACAAACAAAGCCTCACCAACTGCTGACGGGCGG 386
||..|.||||||.|..|.||.||..|.|||.|.|..|||||||..|||||
RBAM_018870__ 337 GGAGTGCCGAAAAATGTTCAGACCGAACCTGATCGCCTGCTGAAAGGCGG 386
BSNT_03107___ 387 TGAAACAATTGGTTCTCTGCTTGCCATTCCAACACCGGGCCATACACCGG 436
.||....||.||.|||.|.||||.||||||..|.||.||.|||||.||||
RBAM_018870__ 387 CGAGCGGATCGGATCTTTACTTGTCATTCCCGCTCCCGGTCATACGCCGG 436
BSNT_03107___ 437 GCAGCATGTCATTTCTTGATACAAGAAACG----GCACTTTAATAGCAGG 482
|.|||.|..|.|||...||||..|||||.| || |.||.|..||
RBAM_018870__ 437 GAAGCCTCGCTTTTAAAGATATGAGAAATGATATGC----TGATCGTCGG 482
BSNT_03107___ 483 AGATGCGTTTCAGTTGCGCGGAGGAATCGCTGTATCAGGTCAGATAAAAT 532
||||||.|||||..|.||.||.||..|.|||||.||.||..||.|.||||
RBAM_018870__ 483 AGATGCCTTTCAAGTACGGGGCGGCCTTGCTGTTTCTGGGAAGCTGAAAT 532
BSNT_03107___ 533 GGACGTTTCCTTTTCCCGCCTTCGCCACATGGAATAAGGAGGAGGCCATC 582
|||..|||||.|||||.||.||.||.||.||||||||.||.||.||..|.
RBAM_018870__ 533 GGAAATTTCCGTTTCCGGCTTTTGCTACGTGGAATAAAGAAGAAGCTGTA 582
BSNT_03107___ 583 AAAAGCGC----ACAATTGCTCGCCGAT-----AAGGCGCCTTCCTGTCT 623
||||..|| |||.|| .||||..|| ||| |.||||
RBAM_018870__ 583 AAAACAGCAAGAACACTT-ATCGCTCATCAACCAAG--------CAGTCT 623
BSNT_03107___ 624 CGCTGTCGGACATGGAAAT-TTC-CTGAGATCACCCGCAGAGCGGATGAG 671
.||.|.||||||||||||| ||| |||..|| ||||..||...||||..
RBAM_018870__ 624 GGCCGCCGGACATGGAAATGTTCTCTGCAAT--CCCGTTGAAATGATGGC 671
BSNT_03107___ 672 ACAGGCAATCCAAAAAGC--AAAGAA----------AGGATGA------ 702
..||||..|..|..|||| ||.||| |||..||
RBAM_018870__ 672 TGAGGCTGTTGAGGAAGCCGAACGAAGCCTGCCGGGAGGCCGATCATAA 720
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